| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2633 |
|---|
| Symbol | pyrH |
|---|
| ID | 4923895 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | - |
|---|
| Start bp | 3107823 |
|---|
| End bp | 3108566 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640164227 |
|---|
| Product | uridylate kinase |
|---|
| Protein accession | YP_001094758 |
|---|
| Protein GI | 127513561 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0528] Uridylate kinase |
|---|
| TIGRFAM ID | [TIGR02075] uridylate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000000396495 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.230715 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACAA ATCCAAAACC TGCTTTTCGA CGTATTCTTC TCAAACTGAG TGGCGAGGCC
CTGATGGGCG AAGAGGGCTT TGGCATCGAT CCCAAGGTGC TAGATCGCAT GGCACAAGAG
ATTAAAGAGC TGGTTGAGCT TGGTATTCAG GTAGGTGTTG TGATTGGTGG CGGTAACCTA
TTCCGTGGTG AAGGCCTAGC ACAAGCAGGC ATGAACCGTG TGGTGGGCGA CCATATGGGC
ATGTTGGCAA CCGTAATGAA TGGTCTGGCG ATGCGCGATG CGCTGCACAG AGCCTATGTG
AATGCCCGCC TGATGTCGGC CATCCCCTTG AAAGGCGTGT GTGACGACTA TAACTGGGCC
GAAGCGATTA GCCTGCTTAA ATCTGGCCGT GTGGTGATCT TCGCCGCCGG TACGGGTAAT
CCTTTCTGTA CCACAGACTC TGCCGCCTGC CTGCGCGGTA TCGAGATCGA AGCCGAAGTG
GTACTCAAGG GCACTAAGGT AGATGGTGTT TACTCAGATG ACCCAGTCAA GAACCCAGAA
GCGGTAAAAT ATGACGAGAT GGGTTATGGC GAAGTCCTGG AAAAAGAATT GAAAGTGATG
GATCTTGCGG CATTTACCCT TGCAAGAGAT CACGATATGC CTATCTTAGT GTTTAATATG
AACAAGCCTG GTGCGCTACG ACGTGTTATC ATGGGCGACC ATGAAGGTAC GCTTATTAGA
AGTAGCCGTA AGACTGCCGA ATAA
|
|---|
| Protein sequence | MSTNPKPAFR RILLKLSGEA LMGEEGFGID PKVLDRMAQE IKELVELGIQ VGVVIGGGNL
FRGEGLAQAG MNRVVGDHMG MLATVMNGLA MRDALHRAYV NARLMSAIPL KGVCDDYNWA
EAISLLKSGR VVIFAAGTGN PFCTTDSAAC LRGIEIEAEV VLKGTKVDGV YSDDPVKNPE
AVKYDEMGYG EVLEKELKVM DLAAFTLARD HDMPILVFNM NKPGALRRVI MGDHEGTLIR
SSRKTAE
|
|---|
| |