Gene Shew_2624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_2624 
SymbolfabZ 
ID4923886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp3098254 
End bp3098715 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content48% 
IMG OID640164218 
Product(3R)-hydroxymyristoyl-ACP dehydratase 
Protein accessionYP_001094749 
Protein GI127513552 
COG category[I] Lipid transport and metabolism 
COG ID[COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases 
TIGRFAM ID[TIGR01750] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.68919e-07 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCAAATC AATTAAATAC GATGGATATC AAAGAGATCC TAAAGTTCCT ACCTCACAGG 
TATCCGTTTT TATTGATCGA TAGAGTCCTC GACTTTACGC CAGGTGAAAC ACTGCATGCG
ATCAAGAATG TCACCATCAA CGAGCCATTC TTCCAGGGCC ATTTCCCTGT AGCTCCTGTG
ATGCCAGGTG TATTGATCCT AGAGGCTATG GCCCAGGCGA CCGGTCTGTT AGCGTTTAAA
ACCATGAGCG ATGAGCCATC TAACGATGCC TTATACTATT TTGCCGGTAT CGATAACGCT
CGCTTCAAGC GTGTGGTCGA GCCAGGCGAC CAACTTCATT TCGAAGTTAA GATGATTAAA
GAACGCCGCG GGATTGGCGT CTTCACAGGT GAAGCTAAGG TCGATGGCGA ACTAGTTTGT
TCGGCAGAGA TCATGTGTGC CCGCAGAGAG ATTGCCAAGT GA
 
Protein sequence
MSNQLNTMDI KEILKFLPHR YPFLLIDRVL DFTPGETLHA IKNVTINEPF FQGHFPVAPV 
MPGVLILEAM AQATGLLAFK TMSDEPSNDA LYYFAGIDNA RFKRVVEPGD QLHFEVKMIK
ERRGIGVFTG EAKVDGELVC SAEIMCARRE IAK