Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_2623 |
Symbol | |
ID | 4920722 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 3097490 |
End bp | 3098257 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640164217 |
Product | UDP-N-acetylglucosamine acyltransferase |
Protein accession | YP_001094748 |
Protein GI | 127513551 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1043] Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase |
TIGRFAM ID | [TIGR01852] acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000885168 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATTGATA AGTTAGCATT TGTACACCCA GATGCCAAAA TCGGTAACAA TGTTACCATA GGCCCATGGA CCTATATCGG CCCAGATGTC GAGATCGGCG ACGACTGTCA TCTGAGCTCT CACGTGGTGG TCAAGGGCCC TACGGTTATC GGCAAGGGTA ACCGTATTTT TCAGTTCGCC TCAGTAGGGG AAGACTGCCA GGATAAGAAG TATGCTGGCG AGCCAACCCG GCTGATCATC GGCGATAACA ATGTGATCCG CGAATCTGTC ACCATACATC GCGGCACGGT GCAGGATAAC AGTGAGACCC GTATCGGCTC CAACAACCTG TTTATGGCCT ATGTGCACAT CGCCCACGAC TGTGTGGTGG GTAACAATGT GATCATGGCT AACAACGCCT CTATCGCCGG CCACGTCCAT GTGGGCGACT GGGCGATCCT AGGCGGCATG ACGGGTGTGC ATCAGTTTGT GCATATTGGT GCACATGCCT TTACCGCTGG TTATTCATTG ATCCTGCAAG ATGTGCCGCC ATTTGTGATG GCGTCGGGAC AGCCTGCTAT CCCAAGGGGA CTGAACAGCG AAGGCATGAA ACGCCGCGGC TTCTCAAAAG AGAGCCAACT GGCAGTGCGC CGTGCCTACA AGACCTTGTA TCGCAAGGGC TTGACCATTG AAGAAGCAGT TGCCGCCTTG GGTGAGGATG CCGAGGACGA GCAGGTTAAG CTGCTGATGG ACTTTGTGGT CAACTCGAGC CGAGGCATTA TTCGTTAA
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Protein sequence | MIDKLAFVHP DAKIGNNVTI GPWTYIGPDV EIGDDCHLSS HVVVKGPTVI GKGNRIFQFA SVGEDCQDKK YAGEPTRLII GDNNVIRESV TIHRGTVQDN SETRIGSNNL FMAYVHIAHD CVVGNNVIMA NNASIAGHVH VGDWAILGGM TGVHQFVHIG AHAFTAGYSL ILQDVPPFVM ASGQPAIPRG LNSEGMKRRG FSKESQLAVR RAYKTLYRKG LTIEEAVAAL GEDAEDEQVK LLMDFVVNSS RGIIR
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