Gene Shew_2623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_2623 
Symbol 
ID4920722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp3097490 
End bp3098257 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content54% 
IMG OID640164217 
ProductUDP-N-acetylglucosamine acyltransferase 
Protein accessionYP_001094748 
Protein GI127513551 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1043] Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase 
TIGRFAM ID[TIGR01852] acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000885168 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTGATA AGTTAGCATT TGTACACCCA GATGCCAAAA TCGGTAACAA TGTTACCATA 
GGCCCATGGA CCTATATCGG CCCAGATGTC GAGATCGGCG ACGACTGTCA TCTGAGCTCT
CACGTGGTGG TCAAGGGCCC TACGGTTATC GGCAAGGGTA ACCGTATTTT TCAGTTCGCC
TCAGTAGGGG AAGACTGCCA GGATAAGAAG TATGCTGGCG AGCCAACCCG GCTGATCATC
GGCGATAACA ATGTGATCCG CGAATCTGTC ACCATACATC GCGGCACGGT GCAGGATAAC
AGTGAGACCC GTATCGGCTC CAACAACCTG TTTATGGCCT ATGTGCACAT CGCCCACGAC
TGTGTGGTGG GTAACAATGT GATCATGGCT AACAACGCCT CTATCGCCGG CCACGTCCAT
GTGGGCGACT GGGCGATCCT AGGCGGCATG ACGGGTGTGC ATCAGTTTGT GCATATTGGT
GCACATGCCT TTACCGCTGG TTATTCATTG ATCCTGCAAG ATGTGCCGCC ATTTGTGATG
GCGTCGGGAC AGCCTGCTAT CCCAAGGGGA CTGAACAGCG AAGGCATGAA ACGCCGCGGC
TTCTCAAAAG AGAGCCAACT GGCAGTGCGC CGTGCCTACA AGACCTTGTA TCGCAAGGGC
TTGACCATTG AAGAAGCAGT TGCCGCCTTG GGTGAGGATG CCGAGGACGA GCAGGTTAAG
CTGCTGATGG ACTTTGTGGT CAACTCGAGC CGAGGCATTA TTCGTTAA
 
Protein sequence
MIDKLAFVHP DAKIGNNVTI GPWTYIGPDV EIGDDCHLSS HVVVKGPTVI GKGNRIFQFA 
SVGEDCQDKK YAGEPTRLII GDNNVIRESV TIHRGTVQDN SETRIGSNNL FMAYVHIAHD
CVVGNNVIMA NNASIAGHVH VGDWAILGGM TGVHQFVHIG AHAFTAGYSL ILQDVPPFVM
ASGQPAIPRG LNSEGMKRRG FSKESQLAVR RAYKTLYRKG LTIEEAVAAL GEDAEDEQVK
LLMDFVVNSS RGIIR