Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_2621 |
Symbol | rnhB |
ID | 4920720 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 3095620 |
End bp | 3096246 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640164215 |
Product | ribonuclease HII |
Protein accession | YP_001094746 |
Protein GI | 127513549 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0164] Ribonuclease HII |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.322497 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCTATCT ATAAACAAAT TACCGCCGAA CAGGTCGAGG CACTCTGCAG CGGTTTCTAC GCCGGCGTCG ATGAAGTGGG CCGTGGCCCC TTGGTGGGCG ATGTGGTGAC CGCCGCCGTG GTGCTGGACC CGAACAATCC TATTGAAGGG CTAAATGACT CCAAGAAGCT GTCGGAGAAG AAGCGCGACG CCCTCTATGA GGAGATCCTC GCCAAGGCGC TGGATGTCAG CGTCGGACGC TGTTCACCGC TGGAGATCGA TGAGCTCAAC ATACTGCACG CGACCATGCT GGCGATGCAG CGCGCCGTCG CAGGACTGCG CGCCCGACCT GACAGAGTAT TGATCGACGG CAATCGGGTA CCGGACTTTA CCGATGAGAC CCTGGAGGGT CATGCGGTGA TCAAGGGCGA TGGCCTGATC CCGGCCATCA GCGCCGCCTC TATCGTTGCC AAAGTGGTGC GCGACAGAGA GATGGAAGCC CTGGATGAGC GCTATCCCGA ATATGGCTTC GCCAAGCATA AGGGCTACCC CACCAAGGCC CATTTCGAGG CGCTCGAGGC CCATGGCGTA CTGGCCGAGC ACCGCAAGAG TTTCAGGCCG GTCAAGGAGC GTCTGGAGGC CTGTTAA
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Protein sequence | MAIYKQITAE QVEALCSGFY AGVDEVGRGP LVGDVVTAAV VLDPNNPIEG LNDSKKLSEK KRDALYEEIL AKALDVSVGR CSPLEIDELN ILHATMLAMQ RAVAGLRARP DRVLIDGNRV PDFTDETLEG HAVIKGDGLI PAISAASIVA KVVRDREMEA LDERYPEYGF AKHKGYPTKA HFEALEAHGV LAEHRKSFRP VKERLEAC
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