| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2617 |
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| Symbol | |
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| ID | 4920716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3087240 |
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| End bp | 3089189 |
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| Gene Length | 1950 bp |
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| Protein Length | 649 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640164211 |
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| Product | potassium efflux system protein |
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| Protein accession | YP_001094742 |
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| Protein GI | 127513545 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0475] Kef-type K+ transport systems, membrane components
[COG0569] K+ transport systems, NAD-binding component |
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| TIGRFAM ID | [TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACACA GCATACTGAT TAAGATCCTG TTGATGTTGA TGATGGCCAT AGTGGCGATC
GCCCTCTTTA GGCGGGCGGG CCTACCGGCT ATCCTGGCCT ATCTGATCAC CGGAGTGATC
AGCGGCCCTT CTGTGTTCAA CTGGTTCACT CAGCAGCAGA TCCACTCGGT GGCCGAGCTG
GGGGTAGTAC TGCTGATGTT CTCTCTAGGT CTCGAATTCT CGCTGCCCAG GCTGTGGGCC
ATGCGCCGCA CCGTATTTGG CCTGGGTAGC GCCCAGGTGT TTGTCACCGC CGTCCTCACC
ATGTGCATCA GCATGCTACT GGGGCTTAAT CTGAGCGAGT CCATCGTGGT GGGCTCGGCC
ATCGCTCTCT CCTCTACTGC CATCGTACTC AAGCTGCTCA ACGAGCGTGG CTGGCTCAGG
CGACGTCACG GTGAGCTGTC GGTGAGTGTC TTGCTGTTTC AGGATCTGGC CGTGGTGCCC
CTGTTGATCC TCATGCCTCT GTTGGCCTCA GATGGCGAGA TGCTGAGCTG GCATCAGATC
TTGCTCGCCA TGGGGGAGGG GGTATTAGCC TTCATCGCCC TGATGGCCGT GGGTAAGTGG
GCGCTGCCTA AGGTGTTTGA TGAGGTGGCG CGCTCGCGCT CCAACGAGCT ATTTGTGCTC
TCTACCCTGG TGGTGGCGCT GGTCACAGGC GCCCTGACCC AGTGGCTGGG GCTCTCCATG
GCGCTGGGCG CCTTTATCGC CGGTATGCTG CTGGGGGAGA GCCAATACAA GCGTCAGCTG
GAGGCGGACA TACGCCCCTT CAGGGATCTG CTGATGGGGC TCTTCTTCAT CTCTATCGGC
ATGTTGCTCG ATTTTAGCCT AGTGATCACC TTCTGGTGGC AGGTACTGCT GCTGGTGGTG
GCGGTGATCA TCGCCAAGGC CTTGATTGTC TTTGGCCTGC TCAGGGCGGC CAAGGAGTCG
TTTCGCACCT CTGTGGCTAC TGCCATCAGC CTGGCGCAGG TGGGGGAGTT CAGTTTCGTG
GTGCTGGCGC TGGCGGTCAA CTATCAATTG CTAGAGATCA CCGTCAGCAC TAAGCTGGTG
ATGGTGGCCG TGCTGTCGAT GGCGGTGGCT CCCTGGCTGG TGCGTCACAG CGTGGATATC
GCCAGACGCC TGCATGGGGT CAAGTCGGTT AAGCAGGGCG GCCACGAGAC TATTCCTATC
CCGGAGCAGA GTAGCGACCT GGTGTTGATT CTGGGTTATG GCCGGGTGGG GCAGACCATA
GCCCGTTTTA TGAAGACGGA GGCGATCCCC TATCTGGTGC TCGACCGGGA CCCCACCAGG
GTGAGCGAGG CGCGCCGGGC GGGAGAGCCT GTCTATTTTG GCGATGTGGC CAAGCGGGCT
ATCCTCAAGC AGGCGCAGAT CAAACAGGCC AAGTTGATCG TGCTCACCTT TACCAGCAGT
CATGTGCTCG ATGAGGTCTT GCCCCTGTGC CGTCAGCTGG CGCCCGAGGC CAAGATCTTG
GTGAGAACCC GCGACGATGA GGGCATGGAG GCGCTGGAGG AGGCGGGCGC CAGTCAGGTG
ATCCCGGAAA CCCTGGAGGG CAGCCTGATG TTGGTGTCTC AGGTGCTCTA TCAGTGCGGC
GTGCCCCTGA CCCGGATCCT CAAGCGCCTC GAATATGAGC GGCGCAATCA CTATCAATAT
CTGCATGGCT TCTTCTCCGG CGAGGAGACA GACTTTACCT TGGAGCTGCT GCACGCCGTG
GCCCTGCCCA AAGGCGCCCA AGTGGTGGGC CAGCCGCTCT CGGCCATTCC TTGGGACAAG
CTCAGGGTGG AGCTCAGGGC GGTGCGCCGC AGCGGCGCCG AGGTGGAAAG CCCTGAGCTT
GACTGGCTCA TTCGCCCCGG GGATATCCTC ATCATTCTGG GTAAGCCAAG GCGCATTGAG
AAGGCCGAGC ATTACCTGCT TCAAGGCTAA
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| Protein sequence | MEHSILIKIL LMLMMAIVAI ALFRRAGLPA ILAYLITGVI SGPSVFNWFT QQQIHSVAEL
GVVLLMFSLG LEFSLPRLWA MRRTVFGLGS AQVFVTAVLT MCISMLLGLN LSESIVVGSA
IALSSTAIVL KLLNERGWLR RRHGELSVSV LLFQDLAVVP LLILMPLLAS DGEMLSWHQI
LLAMGEGVLA FIALMAVGKW ALPKVFDEVA RSRSNELFVL STLVVALVTG ALTQWLGLSM
ALGAFIAGML LGESQYKRQL EADIRPFRDL LMGLFFISIG MLLDFSLVIT FWWQVLLLVV
AVIIAKALIV FGLLRAAKES FRTSVATAIS LAQVGEFSFV VLALAVNYQL LEITVSTKLV
MVAVLSMAVA PWLVRHSVDI ARRLHGVKSV KQGGHETIPI PEQSSDLVLI LGYGRVGQTI
ARFMKTEAIP YLVLDRDPTR VSEARRAGEP VYFGDVAKRA ILKQAQIKQA KLIVLTFTSS
HVLDEVLPLC RQLAPEAKIL VRTRDDEGME ALEEAGASQV IPETLEGSLM LVSQVLYQCG
VPLTRILKRL EYERRNHYQY LHGFFSGEET DFTLELLHAV ALPKGAQVVG QPLSAIPWDK
LRVELRAVRR SGAEVESPEL DWLIRPGDIL IILGKPRRIE KAEHYLLQG
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