| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2614 |
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| Symbol | |
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| ID | 4920713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3084176 |
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| End bp | 3084844 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640164208 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001094739 |
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| Protein GI | 127513542 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTACAGC CACTAAAAAT AATAATAGCT GATGATCATC CACTGTTTCG GCAAGCACTC
GTAAACACCC TAACCACTCA GTTCGATCAG CCTATGCTGT TTGAGGCGGA AACGGTGACG
GCACTGGATG AGATCTTAAC CCAGCATCAG GATGCAGACC TGCTCTTATT GGATCTGAAT
ATTCCTAATG CGCATGGATT CAATACCTTA GTCAATATTC GTAACAGCTA TCCCCACATA
GGGATAGTGG TGATCTCCGG CCAGGAAGAT AAAGTCACTG TGGGTAAGGC GATGTCCTTC
GGCGCGGCGG GCTTTATTCC CAAATCCTCG CCGGTCGAGC AGATGGTCAA GGCGATCAAT
GCCGTGATGG CCGGTCGCCA GTGGACGCCG CCGGGGTGTG AGGATCTTAG CGCCGTGACC
CTGGATAGCA TGAGTAGCAA GATAGCCAGC CTGTCACCGC GTCAGCACAA GATCCTGATG
ATGTTTGCCG ACGGCCTGCT CAACAAGCAG ATCGCCTATG AGTTAGGTCT GTCAGAGGCT
ACTATTAAGG CCCACGCCAG CGCCATCTTC CTCAAGCTTG GGGTACATAC CCGCACTCAG
GCGGTGATCG CCATGAGTCA GCTCTATCTG GACAAGACGC CGCTGACCGC CGCGGTGGAA
GAGGTCTAG
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| Protein sequence | MLQPLKIIIA DDHPLFRQAL VNTLTTQFDQ PMLFEAETVT ALDEILTQHQ DADLLLLDLN
IPNAHGFNTL VNIRNSYPHI GIVVISGQED KVTVGKAMSF GAAGFIPKSS PVEQMVKAIN
AVMAGRQWTP PGCEDLSAVT LDSMSSKIAS LSPRQHKILM MFADGLLNKQ IAYELGLSEA
TIKAHASAIF LKLGVHTRTQ AVIAMSQLYL DKTPLTAAVE EV
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