| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2609 |
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| Symbol | |
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| ID | 4920741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3075526 |
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| End bp | 3076419 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640164203 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001094734 |
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| Protein GI | 127513537 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTTTG AACTCTTAAT TCAATTAATT ATCAACGGCC TGATCGTCGG CCTGCTGTAT
GGCGTGGTGG GCATGTGTTT CGTGCTGGTG TACAAGTCGA CCCAGATCGT TAACTTTGCT
CAGGGGGAGT TTCTGCTGGT GGGGGCTTGG GTCTGCTGGG CGTTCCTGAC CTATTTCCAG
CTGCCCTTTT TCGTCGGCTT CCTCTTCACC CTCTGTTTCA TGGCGGTGTT TGGCGTGCTC
TTACAGATGA TAGTGCTGCG CCCCATGATA GGCGAGCCGA TCATCTCGGT GATCATGGTA
ACTATTGGCC TGTCTATCTT CTTCCAGTCG CTGACCAAGT GGATCTTCGG CGTGTCGCCC
CAGAGCTATC CTCAGGTGTT CGACACTCAG TCCATCGCCA TCTTCGGCCT GAACATAGAG
CTGGCTTATT TGATGAGTAC TGTGATCGCG ATACTCATCA TGGCGGCCTT CTTCCTCTTC
TTTAAGTACT CCAAGCACGG TCTGGCGATG CGCGCCACGG CGTTTGACCA GCAGGTGGCC
CAGAGCCTGG GGATCTCGGT CAAGCAGGTG TTTGCCATGA GCTGGGGCAT CGCCGCCACA
GTATCGGCCA CCGCCGGTGT GGTGATCGGC ATGGTCAACG GTGTGTCTGA TTCGCTCTCC
ACCATAGGCA TCAAGGTGTT CCCCGCGGTG ATCCTGGGCG GGCTGGACTC CATCGTCGGC
GCCATCGTCG GCGGCGTGGT GATAGGCGTG CTGGAAAACA TCGCCGAGTT CTTCGACAGC
CAGTGGCTGC ATATCGGCAA CATGTACGAC ATCGCGCCTT TCTATGTCTT GCTGGTGATC
CTCTGGTTCA AGCCTTACGG CCTGTTCGGC ACCCGTGATA TCGAGCGAAT TTAA
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| Protein sequence | MNFELLIQLI INGLIVGLLY GVVGMCFVLV YKSTQIVNFA QGEFLLVGAW VCWAFLTYFQ
LPFFVGFLFT LCFMAVFGVL LQMIVLRPMI GEPIISVIMV TIGLSIFFQS LTKWIFGVSP
QSYPQVFDTQ SIAIFGLNIE LAYLMSTVIA ILIMAAFFLF FKYSKHGLAM RATAFDQQVA
QSLGISVKQV FAMSWGIAAT VSATAGVVIG MVNGVSDSLS TIGIKVFPAV ILGGLDSIVG
AIVGGVVIGV LENIAEFFDS QWLHIGNMYD IAPFYVLLVI LWFKPYGLFG TRDIERI
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