Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_2584 |
Symbol | |
ID | 4920890 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 3048520 |
End bp | 3049269 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640164178 |
Product | electron transfer flavoprotein beta-subunit |
Protein accession | YP_001094709 |
Protein GI | 127513512 |
COG category | [C] Energy production and conversion |
COG ID | [COG2086] Electron transfer flavoprotein, beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000331041 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTAT TGGTGCCAGT TAAACGCGTC GTCGATGCTA ATGTGAAGGT CAGGGTTAAC GCTGACAATA CAAATGTCGA TACCGCAAAT CTGAAGATGG CCATTAACCC ATTTTGTGAG ATTGCTGTAG AAGAAGCGGT ACGTTTGAAA GAAGCAGGTA TTGCGACCGA GATTGTGGTA GCAACCATAG GGCCTAAAGC GTCGCAAGAG CAGCTACGCA CGGCGATGGC GCTGGGCGCC GACCGCGGTA TTCATGTTGA AACCGATGAA GAGCTTGCTC CGCTTTCTAT TGCAAAGATC CTTAATGCGA TTCAAGCCAA TGAACAGGCT CAGCTGATCA TGCTGGGTAA GCAATCGATC GATGGCGACA ACAATCAGAC TGGCCAGATG CTGGCGGCGT TGGCTGGACT GCCTCAGGCT ACCTTTGCTT CTGAGGTGAA GGTTGAGGGC GAACAACTTG TGGTGACCCG TGAAATCGAC GGCGGCCTGC AGACCCTTAA GATGCCACTG CCTGCGATTG TCACCACAGA CCTGCGTCTG AACGAGCCTC GCTATGCCAA ATTACCTAAC ATCATGAAGG CGAAACGTAA GCCGCTCGAT ACCGTGACGG TAGACAGCCT GGGCGTGACC CTGAAGCAGC ACCAGAAGGT GCTCAAGGTG ACACCGCCTG CCGAGCGTCA AGCGGGTATT ATGGTGGCTT CTGTCGAGGA GCTGGTGGAA AAGCTAAAGA ATGAAGCGAA GGTGATCTAA
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Protein sequence | MKVLVPVKRV VDANVKVRVN ADNTNVDTAN LKMAINPFCE IAVEEAVRLK EAGIATEIVV ATIGPKASQE QLRTAMALGA DRGIHVETDE ELAPLSIAKI LNAIQANEQA QLIMLGKQSI DGDNNQTGQM LAALAGLPQA TFASEVKVEG EQLVVTREID GGLQTLKMPL PAIVTTDLRL NEPRYAKLPN IMKAKRKPLD TVTVDSLGVT LKQHQKVLKV TPPAERQAGI MVASVEELVE KLKNEAKVI
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