Gene Shew_2584 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_2584 
Symbol 
ID4920890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp3048520 
End bp3049269 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content52% 
IMG OID640164178 
Productelectron transfer flavoprotein beta-subunit 
Protein accessionYP_001094709 
Protein GI127513512 
COG category[C] Energy production and conversion 
COG ID[COG2086] Electron transfer flavoprotein, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000331041 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTAT TGGTGCCAGT TAAACGCGTC GTCGATGCTA ATGTGAAGGT CAGGGTTAAC 
GCTGACAATA CAAATGTCGA TACCGCAAAT CTGAAGATGG CCATTAACCC ATTTTGTGAG
ATTGCTGTAG AAGAAGCGGT ACGTTTGAAA GAAGCAGGTA TTGCGACCGA GATTGTGGTA
GCAACCATAG GGCCTAAAGC GTCGCAAGAG CAGCTACGCA CGGCGATGGC GCTGGGCGCC
GACCGCGGTA TTCATGTTGA AACCGATGAA GAGCTTGCTC CGCTTTCTAT TGCAAAGATC
CTTAATGCGA TTCAAGCCAA TGAACAGGCT CAGCTGATCA TGCTGGGTAA GCAATCGATC
GATGGCGACA ACAATCAGAC TGGCCAGATG CTGGCGGCGT TGGCTGGACT GCCTCAGGCT
ACCTTTGCTT CTGAGGTGAA GGTTGAGGGC GAACAACTTG TGGTGACCCG TGAAATCGAC
GGCGGCCTGC AGACCCTTAA GATGCCACTG CCTGCGATTG TCACCACAGA CCTGCGTCTG
AACGAGCCTC GCTATGCCAA ATTACCTAAC ATCATGAAGG CGAAACGTAA GCCGCTCGAT
ACCGTGACGG TAGACAGCCT GGGCGTGACC CTGAAGCAGC ACCAGAAGGT GCTCAAGGTG
ACACCGCCTG CCGAGCGTCA AGCGGGTATT ATGGTGGCTT CTGTCGAGGA GCTGGTGGAA
AAGCTAAAGA ATGAAGCGAA GGTGATCTAA
 
Protein sequence
MKVLVPVKRV VDANVKVRVN ADNTNVDTAN LKMAINPFCE IAVEEAVRLK EAGIATEIVV 
ATIGPKASQE QLRTAMALGA DRGIHVETDE ELAPLSIAKI LNAIQANEQA QLIMLGKQSI
DGDNNQTGQM LAALAGLPQA TFASEVKVEG EQLVVTREID GGLQTLKMPL PAIVTTDLRL
NEPRYAKLPN IMKAKRKPLD TVTVDSLGVT LKQHQKVLKV TPPAERQAGI MVASVEELVE
KLKNEAKVI