Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_2558 |
Symbol | |
ID | 4921098 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 3015276 |
End bp | 3016148 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640164152 |
Product | 1,4-dihydroxy-2-naphthoate octaprenyltransferase |
Protein accession | YP_001094683 |
Protein GI | 127513486 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1575] 1,4-dihydroxy-2-naphthoate octaprenyltransferase |
TIGRFAM ID | [TIGR00751] 1,4-dihydroxy-2-naphthoate octaprenyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCCCT GGATCCTGGC GACACGCCCA CGTACTCTTC CCGCAGCCAT TGGCCCTATC TTAGTCGGTA ATGCCCTTGC CCTGTCATTG ACACAATTTA GTTGGCTTAT CGCCGCAACT TCAATGTTGT GCGCCCTGCT GCTGCAGATC GCCGTTAACC TGGCGAACGA CTACTTCGAT TTTAAGAGCG GTATCGACAC CGAGGAGCGA CTCGGCCCGG TGCGCGTCAC CCAGAGTGGC CTGCTCGACC CCAGCAAGGT ACGCAACGCC ATGATCGCCT GCCTGCTGCT GGCGCTACTG GTGGGCTCGC TGCTCATCTA TCATGGTGGC TGGCCCATCG CCATCCTGGC CGCCGCCTCT ATCCTCGGCG CCCTGGGTTA CAGTGGCGGC CCCTACCCGC TGGCCTCCCA TGGTCTGGGT GAAGTCGCTG CCTTTATCTT CTTCGGCCTG GTGGCCGTGG TCGGCAGCTA CTACCTTCAG GCCCATGACA CCAGTGTCGC CGCCTGGATC TTAGGCAGCG CCATCGGCCT GTTTAACGCC GCCGTGATGC TGGTAAACAA CACCCGCGAC ATCCCCACGG ATGCCAAGGC AGGCAAGCGC ACCCTGGCGG TTAAGATAGG TGAAGGTCAG GCCAGAGTCC TGTATCAGGC GCTTGTCTAT CTGCCTTTCG CCCTCGTCAT CGGCGGTTTT CTGCTTGGGA CTTTACCCGG CCTGCCTGTG CTGCTCGGTG GCCTGTCGCT AGTCCTGGCG CGCAAACTCA ACAGCGAATT TAGTCAGACC TCGGGGGCGG CGTTAAACCC GCTGCTGGGA CGCACGGCGA AACTCACGGT GATCTTCAGC GCCCTGTTCA GCCTAGGACT CGCCTTAGCC TAA
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Protein sequence | MNPWILATRP RTLPAAIGPI LVGNALALSL TQFSWLIAAT SMLCALLLQI AVNLANDYFD FKSGIDTEER LGPVRVTQSG LLDPSKVRNA MIACLLLALL VGSLLIYHGG WPIAILAAAS ILGALGYSGG PYPLASHGLG EVAAFIFFGL VAVVGSYYLQ AHDTSVAAWI LGSAIGLFNA AVMLVNNTRD IPTDAKAGKR TLAVKIGEGQ ARVLYQALVY LPFALVIGGF LLGTLPGLPV LLGGLSLVLA RKLNSEFSQT SGAALNPLLG RTAKLTVIFS ALFSLGLALA
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