Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_2549 |
Symbol | |
ID | 4921164 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 3006851 |
End bp | 3007468 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640164143 |
Product | NAD(P)H dehydrogenase (quinone) |
Protein accession | YP_001094674 |
Protein GI | 127513477 |
COG category | [R] General function prediction only |
COG ID | [COG2249] Putative NADPH-quinone reductase (modulator of drug activity B) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGAGC CACAACAAGC CGTACTCCTG TTATTGGCGC ATCCTTCCCA ACATAGATCT GAAGTTAATC TGCCCCTGTT TGAACTGGCC AAGACGATAC CCGGTGTCAC CACTGTGGAT CTCTATGGCG AGTATCCCGA GTTTGATATC GACATAGAGC GCGAGCAGCA GCGCCTGCTG GCCCATGATG TGGTGATCTT TCAGTTTCCC CTCTACTGGT ATTCCACGCC CGCCATCCTA AAGGAGTGGC AAGACCTGGT GCTGGAATAT GGCTTTGCCT ATGGCACGGA TGGCAATGCA CTCAAGGGTA AGCGCTTCTT CTGCGCCATC ACGGCCGGGG GTAAGGAGGA GGCCTATCAG GCCGAGGGTT ACAATCATTT CACCCTGAAA CAGCTGCTGG CGCCGTTGGA GCAGACCGCC AGCCTCACCG GTATGCGTTA TCTGCCGCCA TTCGCATTGT TTGGTGCCCG CACCGCCGTC GAAGATGGCC TGATGGCGCA GCACCTCGAG GAGTGGCGCG AGCTGCTCAC AGCCCTGGTG GCGGGCAAGC TCAATCGCCG TCTGGCCGCC AAGCTTGAGA GGTTAAACGG CCATCTGGAT CAGATCATCA CGGGGTAA
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Protein sequence | MSEPQQAVLL LLAHPSQHRS EVNLPLFELA KTIPGVTTVD LYGEYPEFDI DIEREQQRLL AHDVVIFQFP LYWYSTPAIL KEWQDLVLEY GFAYGTDGNA LKGKRFFCAI TAGGKEEAYQ AEGYNHFTLK QLLAPLEQTA SLTGMRYLPP FALFGARTAV EDGLMAQHLE EWRELLTALV AGKLNRRLAA KLERLNGHLD QIITG
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