| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2523 |
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| Symbol | |
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| ID | 4921228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2972045 |
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| End bp | 2974318 |
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| Gene Length | 2274 bp |
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| Protein Length | 757 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640164117 |
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| Product | hypothetical protein |
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| Protein accession | YP_001094648 |
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| Protein GI | 127513451 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR03507] decaheme c-type cytochrome, OmcA/MtrC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAAAC GGTATTCAAT CAGTACCGCA GTCAAAGCAG CATTCGGTGT CGGAGCCTTA
TCTCTGGCGC TGGTCGGCTG TGGCGGCAGC GATGGTAAAG ATGGTGAAGA TGGCAAGCCT
GGTGAAATCG CGGTCGATAT CAACAGCGCG ACTGCGGTCC AAACCAAGAT AGAAAGCGCC
AGCTATGACG CGGCGGCCAA GACCCTAAGC TTCGAATTTA GCCTGACCAA TCCTAATGGC
GTCGCCGTCA CAGGATTAGA GGCGCTCACC GACCCACTAC GCATCGCCTT CGGTCGTATG
GGCACCCGCA GCGAGGCCTT CACACCCTAC AGCCTGGAAG ATGGCACCCA GGTCACCGGC
CGCGCCGATG GCGACGAGGA GATCTGGCTC TCTTACCGCA ACGCCAGCAA GAACGGCGTA
CCTATGACGG GCACCAACAA CTGGCGTCCA ACTCGCGACT GCCCAGAAGG ACTGAATTGC
CTAAGTTACC TAGGCGAAGG CCGTTATCGG GTCACGGCGC CAGAGATAAT AGACACCAAC
GGCCTGGACT ACGACTATGA TGCCAACCGT ATCAATGGTA TCTACCTGAT CACCTATGGT
GTGGGCCAAA ACAAGCTGAA GAATGTCGAA GCCTACTACT GGGATCCTTT GACCGAGCAG
TCGGTCTCTT CGCCTAAGAA AGTGCTGGAG ATGGATACCT GTACCAGCTG TCACGTAGGT
CAGGATCATA TCCGCCACGG CAACTATGGT AATACCGCCG ACGGCTGTGG TTTCTGCCAC
ACTGACTATA CACAGTACAG CGGCTCAGGT ATCGATGGCG AAGGCAACAC GGTCGAATTT
AACTTTGATG GCTCCATCAA GGGACTGGTT CACGCAGTGC ACACAGGCAT CACAGAGGGG
GATCGCCGCG AGCTGGCCAA GTTCAACTCG GTTATCGCCA ATGCCAACAA CCCAGCCTTT
ACCTATGAGT TTGATGGTGC GGCGCTCGAT AGCGAAGGCA ATCCTAAGGC CGAGCTTAAC
TTCCCGGCCT CGACAGCCAA CTGTCAAAGC TGTCACGTAA GCTACACCAC CACAGAAGAA
ACCTTGCCCG AAGGCCTGAC CGCTCACGCC CTGGCTTGGT TTGGCGATAA AGATGTGACC
AGCTGTCAGA GCTGTCATGG CGAATACCAC AAGGGCAGCA GCCTGGTGGC GCCGGGTGAA
GAAGGCGCAA CCATGGTAGG TTGTGTCACC TGTCACAGCA GCCAAGATGG CAATACCCGC
GGCGGCGCCT TCCGTCACTT TGCCGGCCAC GAGCAGGCCA GCAGCCAGGC CGCGTCACAG
GCCGGTATCT TAGTCGGTGC TAGCTACAGC CAGATCGCCT GGGATGAAAC CAGCGCGACC
TTAAGCTTTA CCCTTAACCT GAATAAGGGT GAAGAGGCGG TTACCAGCCT ACATGTACCG
CGCGTTACCG TGTACGTTAA TGCCGTCGAT GCGGTTAAAC CTGACGCCTA CCTGGCGGCG
CGCACCAGTG GTAGTGCAAC CGCGAATCCT GATGGCAGCT ATACGGTGAC CGTCGATGCG
TCTAAGCCTA ACTATGGCCT ACCTTCACTG GCCGAGGTTA TTGCCAATGG GGCCGATCTG
GCGATCACCT CAAGCTTTAG CACCTGCTTT AAGAACAAGT CTTCAACCTT GGTTGAACTT
GACGGCGAAG GCAACTGCGC CGGCGTATTA AGTGCCAACG CGGCGAAGAC TGAGTTTGTT
AAGCTTGACG GAACGCCTGG TGCGGTGCGT GCCAGCGCCG TGGACTATGA CAACTGCGCA
AGCTGTCACA ACAACGACAT GGTGGCCCGT AAGGGTGCGG CGCACTACCG CAACGCCGAC
GTACACACCT GTGCCCAATG TCACGAAGCC GGTGACTACA ACAGCCTGGT GGTTCGCGTT
CACGGTACCT TCGGTAAGGC CCATGGCCGC GCCGATGTGC ATCAACTGGT CAGCAGCGCC
AACTGCTCAG CCTGTCACAG CGATCTCAAC TTCGGTCTAG AGAATGCACG CTCAACCCCG
ATGCGCTGGA ACAAGGGCGA TGCCAGCTAC TCCAGCCCAC AGGCCGGTGT GTGCGCCTCT
TGCCACGTCT CATCGAGCTA TGAGATCGGC GGTGGTAAAG ATGCGGCCAA GTCTCACATC
GAGAGCATGG GCGGCGTCGT TGCCGGCAGC TATGAAGCGG CCATGCTAAA CAGCGAGTCA
TGCCTCACCT GCCACAGCGC AGAGAAGGTC GCCGAGCTGC ACAAGCAAAA CTAA
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| Protein sequence | MMKRYSISTA VKAAFGVGAL SLALVGCGGS DGKDGEDGKP GEIAVDINSA TAVQTKIESA
SYDAAAKTLS FEFSLTNPNG VAVTGLEALT DPLRIAFGRM GTRSEAFTPY SLEDGTQVTG
RADGDEEIWL SYRNASKNGV PMTGTNNWRP TRDCPEGLNC LSYLGEGRYR VTAPEIIDTN
GLDYDYDANR INGIYLITYG VGQNKLKNVE AYYWDPLTEQ SVSSPKKVLE MDTCTSCHVG
QDHIRHGNYG NTADGCGFCH TDYTQYSGSG IDGEGNTVEF NFDGSIKGLV HAVHTGITEG
DRRELAKFNS VIANANNPAF TYEFDGAALD SEGNPKAELN FPASTANCQS CHVSYTTTEE
TLPEGLTAHA LAWFGDKDVT SCQSCHGEYH KGSSLVAPGE EGATMVGCVT CHSSQDGNTR
GGAFRHFAGH EQASSQAASQ AGILVGASYS QIAWDETSAT LSFTLNLNKG EEAVTSLHVP
RVTVYVNAVD AVKPDAYLAA RTSGSATANP DGSYTVTVDA SKPNYGLPSL AEVIANGADL
AITSSFSTCF KNKSSTLVEL DGEGNCAGVL SANAAKTEFV KLDGTPGAVR ASAVDYDNCA
SCHNNDMVAR KGAAHYRNAD VHTCAQCHEA GDYNSLVVRV HGTFGKAHGR ADVHQLVSSA
NCSACHSDLN FGLENARSTP MRWNKGDASY SSPQAGVCAS CHVSSSYEIG GGKDAAKSHI
ESMGGVVAGS YEAAMLNSES CLTCHSAEKV AELHKQN
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