| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2522 |
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| Symbol | |
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| ID | 4921289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2969343 |
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| End bp | 2971505 |
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| Gene Length | 2163 bp |
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| Protein Length | 720 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640164116 |
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| Product | decaheme cytochrome c |
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| Protein accession | YP_001094647 |
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| Protein GI | 127513450 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03507] decaheme c-type cytochrome, OmcA/MtrC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGGCA CTATGATGGA TATGAAGAAG AAGGTGAATC AATGGAGCCT CATCGCCCTG
AGTTGCAGCG CGCTGCTACT GGGCTGTGGT AGCGACGGCA AGGATGGTAA AGACGGCCCC
GACGGTGTCA TAGGCGTCAG CATCACAGAT ACCCCAAGCG TGATGGCCCA GTTTACCCAG
GCATCGGTAG AAGATGGCCA GGTCAGCGTG ACCTTTAAGC TTGAAAATGC CAACGGGGTG
GCGGTTCTCG GCCTGACCAA AGACTATGAT CTCAGATTCG GTATTGCCCA GCTGGCCCAG
GTCACAGAGA CGATTGACGG CCAAAGTTTT GATCGCGGCT ACCAGTGGCA GGCCTACATC
AACAGCCTCA GACAGCCGGG TTCATTGCCA GATGACACCT CAGGCCTTAA CCCCTCGCCT
AAATATCAGG CCAATGTCGA GGCGGCCAGC GCCTGCGAAG ACTGTCTGAC GGATAATCTC
GATGGCAGCT ACACCTATAA ATTTCAGCAA AACATCGCCA ATGTCACCGA GCCTTTGGCT
ATCACCTACA ATGGCGATAA CACCCACAGG GTCACCCTGG AGCTAAAACT GCCCCAGGCG
ACTGCCAATG CGCACCATGA CTGGCAGCCC TCATCGGGTT CGGCCGACGG GATTCAAACC
CGCAACGTGG TACGTAAAGA AACCTGCCTT AACTGTCACC AGGAGGAGAG CCTAGCACTG
CACGGTGGCC GCCGCATCAG CCTTGAGAAC TGCGCCAGCT GTCACACCGC GACCTCTGGC
GATCCCGAGA GCGGCAACAG CATCGAATTT ACCTACCTGA TCCATGCCAT CCACAAGGGT
CAGGACAGGG TTACCAGCAC CCCTGAAGGG ATTGTACCCG CCCCCTATAA GATAGTGGGC
TTTGGCGGCA GCCTGCACGA CTATGGCAAG GTGATGTTCC CGCAGAAGCC AGCAGCCAAC
TGTGCCGCCT GTCACAAAGA GGGGGACGGC GCCCCAAGCG ACGCCGCCCT GTTTAAGGCT
GATAACTCCA GCATCGCCTG TATCAGCTGT CACACCGAGA AACCATCGCA GAATCACTCA
AGCACCAACT GCGTCGCCTG CCACAACGCC ACGGATACCT ATCCGGGCAC AGGCAACGCC
GAGAAGCGCC ATGGCGACGT GCTAAAGGCC TACTCGCTGG CCCAGGCCAT GGGCGTCAGT
TTCAGCAACA TAGGCCTGGA TGGCGACGGC AAGCTGAAAT TTGATCTCCA GGTAACCGAC
TCTGCCGGCA ATCCGGTAGC CAGCGAATTT ATCGAGCTTG GCACCCGCGT CGTGGTCGCC
TGGGATGTGG ACAAGGACTA CCCGGCCTAC ACGGATGCCT CATACAGCAA TCGTCGCTTC
AGACTGTCCC AAGGCACCTA TGACGATGTC AGCAAGACCT TCACCATAGT GGCCAGCAGC
TTCGACATGC CAATGGATGC AGCGGGCAAG ACCTTCGAGC TCTGGTCTGC CATAGAGGTG
TGCTTCAACC ACGGCGGCTA TGGCGTTGCC GATGTGGTGA TGACCGCCTG TAGCGATGAT
ACCCGCTCGG TAGCCGTTAA AGAGGCGCCC TATCGCTTCG TCTGGTCCGG CACAGGCGTT
GCCGAAGATG GCCAGGTGGC CATGCGCCGC GCCATCGTCG ATACCAGCAA GTGTCAGACC
TGCCACAACC AGGAGAATCA CCATTACAAC AATGGTTATA ACTGTCAGAC CTGTCATACC
TCAGACAAGA CCACCAGCGG CGATGACAGC TATCCGGGCG GACGTCGCCC CACCAGCTTC
GCCTTTAAGG CCCACGAGGC AGAGGGTCAC TACCTCAAGT ATGCTGGCGT GCAGTCGGGC
ACAGTGCTCA AGACAGACTG CCTCACCTGT CATACCGATG ATGGCATCAC ACTTGGCCGC
GCAAGCGATC GCGTCTGGCG CTATGGCGAT ACCACCACAG GCGTAGATAT CTGGGTCTCA
TCCGATGCCG GCGCCTGCCT GAGCTGCCAC CAGAAATACC TTAAGGATTC TGGTGCAGCC
CATATCCAGG CCAACGGCGG CATCTTAGAC GGTATGGATG CAGACGATGT GCGCGCCCGG
GCGGCAGAGA CTTGCGCCAC CTGCCATACG CCGACTCAGC TGTTAGGCAT TCACCAGGAG
TAG
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| Protein sequence | MEGTMMDMKK KVNQWSLIAL SCSALLLGCG SDGKDGKDGP DGVIGVSITD TPSVMAQFTQ
ASVEDGQVSV TFKLENANGV AVLGLTKDYD LRFGIAQLAQ VTETIDGQSF DRGYQWQAYI
NSLRQPGSLP DDTSGLNPSP KYQANVEAAS ACEDCLTDNL DGSYTYKFQQ NIANVTEPLA
ITYNGDNTHR VTLELKLPQA TANAHHDWQP SSGSADGIQT RNVVRKETCL NCHQEESLAL
HGGRRISLEN CASCHTATSG DPESGNSIEF TYLIHAIHKG QDRVTSTPEG IVPAPYKIVG
FGGSLHDYGK VMFPQKPAAN CAACHKEGDG APSDAALFKA DNSSIACISC HTEKPSQNHS
STNCVACHNA TDTYPGTGNA EKRHGDVLKA YSLAQAMGVS FSNIGLDGDG KLKFDLQVTD
SAGNPVASEF IELGTRVVVA WDVDKDYPAY TDASYSNRRF RLSQGTYDDV SKTFTIVASS
FDMPMDAAGK TFELWSAIEV CFNHGGYGVA DVVMTACSDD TRSVAVKEAP YRFVWSGTGV
AEDGQVAMRR AIVDTSKCQT CHNQENHHYN NGYNCQTCHT SDKTTSGDDS YPGGRRPTSF
AFKAHEAEGH YLKYAGVQSG TVLKTDCLTC HTDDGITLGR ASDRVWRYGD TTTGVDIWVS
SDAGACLSCH QKYLKDSGAA HIQANGGILD GMDADDVRAR AAETCATCHT PTQLLGIHQE
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