| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2516 |
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| Symbol | |
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| ID | 4921283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2959443 |
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| End bp | 2961113 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640164110 |
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| Product | glutaminyl-tRNA synthetase |
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| Protein accession | YP_001094641 |
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| Protein GI | 127513444 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0008] Glutamyl- and glutaminyl-tRNA synthetases |
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| TIGRFAM ID | [TIGR00440] glutaminyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0318208 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCATG TGGACACCGA AGTACGTCCA AGTAACTTCA TTCGTAACAT CATAGATGAA
GATTTAGAGA GCGGTAAGCA CACCCGTGTG CACACTCGTT TTCCGCCCGA GCCAAACGGC
TATCTTCATA TCGGTCACGC AAAATCGATC TGTTTGAACT TCGGTTTGGC GCAGGACTAC
AAGGGGCTAT GTAACTTACG TTTTGATGAT ACCAACCCTG AGAAAGAGGA TATCGATTAC
GTTAACTCTA TTCAGGCCGA CGTACATTGG TTAGGTTTCC AATGGGATGG TGAGATCCGT
TATTCGTCGA ACTATTTCGA TCAGCTGCAC CAATACGCGG TAGAACTTAT CAACAAGGGA
CTGGCTTATG TCTGTTTCCT CAATGGTGAG CAGACCCGTG AATACCGTGG CACCCTGAAA
GAGCCGGGTA AGAACAGTCC ATATCGCGAT ACCTTTGTCG AAGAAAACCT TGAGCTGTTC
GAGAAGATGC GCAAGGGCGA ATTCAAAGAG GGCGAATGTG CACTCAGGGC CAAGATCGAT
ATGGCGTCAC CTTTCATGTG TATGCGCGAC CCTGTGATCT ATCGTATCCG TTTCGCCCAT
CACCATCAGA CTGGCGACAA GTGGTGCATC TACCCTATGT ATGATTTCAC CCACTGTATT
TCCGATGCGC TGGAAGATAT CACTCATTCG CTCTGTACTC TGGAGTTCCA GGATAACCGC
CGTCTGTATG ACTGGGTGCT GGATAACCTG GACGATTTCC AGGCGCCAAA CCGTACCCGT
CAATATGAGT TCTCTCGCCT GAATCTGGAA TACACCCTGA TGTCTAAGCG TAAGCTTAAC
GATCTTGTGG TGCGCGGTCT GGTATCAGGA TGGGACGACC CACGTATGCC AACCATCGCC
GGCTTGCGTC GTCGTGGCTA CACGCCTGCG GCGATTCGCG AGTTCTGCCG TCGTATCGGT
GTGACCAAGC AAGAGAACAT GGTCGAAGTC AGCATGCTTG ACGCCTGTAT CCGTGAAGAG
CTGAACGAGC ACGCGCCTCG CGCCATGGCG GTGATCAACC CGGTTAAGGT GATCATCGAA
AACTACCCGG AAGGCCAGGT AGAGAAGCTA TCTGCACCGG CGCACCCGAC TATCGAGTCT
ATGGGCGAGC GCGAGCTGGT CTTCGGTCGC GAACTCTATA TTGATGCCGA TGATTTCCGT
GAAGAGGCCA ACAAGAAGTA CAAGCGTCTC ATTCAGGGCA AAGAGGTGCG TCTGCGTAAC
GCCTATGTGA TCAAGGCCGA GCGCTGCGAT AAAGATGAGG CGGGCAATGT GACCACCATC
TATTGTACCT ATGACGATCA GACCCTGGGT AAGAACCCAG CCGATGGTCG TAAGGTGAAA
GGGGTGATCC ATTGGGTTGA GGCCACAAGC GCCGTGCCTG CCGAGTTCCG TCTATATGAC
AGACTCTTCA ATCAGCCAAA CCCGGCGGCC GCCGAGACGG TCGATGAGGT GTTAAACCCT
AAGTCATTGG TGGTTAAGCA TGGCTTGGTC GAGCCTGGCC TGGTTAATGC GGAGGCCGAG
AAGGCCTATC AGTTCGAGCG CGAAGGTTAC TTCTGCGCCG ATAGCAAAGA TTCATCGCCT
GAGCATCTGG TGTTTAACCT GACGGTTGCC CTGCGAGACT CTTCTAACTA A
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| Protein sequence | MSHVDTEVRP SNFIRNIIDE DLESGKHTRV HTRFPPEPNG YLHIGHAKSI CLNFGLAQDY
KGLCNLRFDD TNPEKEDIDY VNSIQADVHW LGFQWDGEIR YSSNYFDQLH QYAVELINKG
LAYVCFLNGE QTREYRGTLK EPGKNSPYRD TFVEENLELF EKMRKGEFKE GECALRAKID
MASPFMCMRD PVIYRIRFAH HHQTGDKWCI YPMYDFTHCI SDALEDITHS LCTLEFQDNR
RLYDWVLDNL DDFQAPNRTR QYEFSRLNLE YTLMSKRKLN DLVVRGLVSG WDDPRMPTIA
GLRRRGYTPA AIREFCRRIG VTKQENMVEV SMLDACIREE LNEHAPRAMA VINPVKVIIE
NYPEGQVEKL SAPAHPTIES MGERELVFGR ELYIDADDFR EEANKKYKRL IQGKEVRLRN
AYVIKAERCD KDEAGNVTTI YCTYDDQTLG KNPADGRKVK GVIHWVEATS AVPAEFRLYD
RLFNQPNPAA AETVDEVLNP KSLVVKHGLV EPGLVNAEAE KAYQFEREGY FCADSKDSSP
EHLVFNLTVA LRDSSN
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