| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2511 |
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| Symbol | cysS |
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| ID | 4921278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2954783 |
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| End bp | 2956162 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640164105 |
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| Product | cysteinyl-tRNA synthetase |
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| Protein accession | YP_001094636 |
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| Protein GI | 127513439 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0215] Cysteinyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00435] cysteinyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000706228 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGAAGC TATACAACAG TCTTACCCGC CAAAAAGAGG AATTTAAGCC AATACAGCCA
GGTAAAGTCG GCATGTATGT CTGCGGGGTT ACCATTTATG ATTTGTGTCA TATTGGTCAC
GGACGTACGT TTGTTGCTTT TGACATGATC GTCAGATACC TGAGATATAT CGGCTACGAT
GTGAATTTCC ACCGTAACAT CACAGATGTC GACGATAAGA TCATCAAGCG CGCCACCGAG
AATGGCGAGA GCTGCGATGC CCTCACCGAG CGTCTGACTC AAGAGATGTA TCACGACTTC
GACGCGCTGA ACATGAAACG TCCCGATTTT GAGCCTCGCG CGACTCAGCA CATGCCTGAG
ATCATCGAGA TGGTCGAGCG CCTACTGGAG CGTGACCATG CCTATATCGC CGACAATGGC
GATGTGCTCT TCAGCGTCGC GTCCTTCCCT GAATATGGTC GTCTGTCTGG TCAGAACCTG
GATCAACTTC AGGCCGGTGC CCGCGTAGAA GTGGACGAGA ACAAGCGCGA TCCTATGGAT
TTCGTGCTGT GGAAGATGTC TAAGCCGGGC GAGCCAACTT GGGATTCGCC ATGGGGCCCT
GGTCGTCCAG GCTGGCATAT CGAATGTTCG GCGATGAACA GCAAGCATCT GGGAGAGCAT
TTCGATATTC ACGGCGGCGG TTCAGATCTG CAGTTCCCTC ACCATGAGAA CGAGATCGCT
CAGTCTTGCT GCGCCCACGA CACCCCCTAT GTGAACTACT GGATGCATAC CGGTATGGTG
ATGGTGGACA AGGAGAAGAT GTCTAAGTCG CTCAATAACT TCTTCACCAT TCGTGACGTG
CTCGCGCATT ATGATGCCTC GACCGTGCGT TACTTCCTGC TGTCTGGTCA CTACCGCAGC
CAGCTGAACT ACTCGGAAGA TAACCTAAAG CAGGCTAAGG CGGCGCTCGA GCGTCTCTAC
ACAGCGCTGA AGGGACTGGA TCTGAGCGTC GAGGCTGCGC CAGCAAGCGA GTATGTGGCT
AAGTTTAAAG AGGCTATGGA CGATGACTTC AATACGCCTG AGGCCTACTC AGTGCTGTTT
GACATGGCTC GTGAGATCAA CCGTCTAAAA GTTGATGACC TGGCGGCGGC TTCTGCCCTG
GGCGTTAGCA TGAAGCAGTT GGGTGACGTG TTGGGGATCC TAGAGCAGGA TGTCGATGGC
TTCTTTAAGG GTGAGGGCAG CGACGATGAG GTGGCGCAGA TCGAAGCCTT GATCGCAGAG
CGTAACCGTG CACGCACCGA GAAGGATTGG GCCGCGGCCG ATGTGGCGCG TGATGGTCTT
AATGCCCTTG GGGTGATCCT GGAAGATGGC CCGGAAGGAA CGACCTGGCG TAAGAAGTAA
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| Protein sequence | MLKLYNSLTR QKEEFKPIQP GKVGMYVCGV TIYDLCHIGH GRTFVAFDMI VRYLRYIGYD
VNFHRNITDV DDKIIKRATE NGESCDALTE RLTQEMYHDF DALNMKRPDF EPRATQHMPE
IIEMVERLLE RDHAYIADNG DVLFSVASFP EYGRLSGQNL DQLQAGARVE VDENKRDPMD
FVLWKMSKPG EPTWDSPWGP GRPGWHIECS AMNSKHLGEH FDIHGGGSDL QFPHHENEIA
QSCCAHDTPY VNYWMHTGMV MVDKEKMSKS LNNFFTIRDV LAHYDASTVR YFLLSGHYRS
QLNYSEDNLK QAKAALERLY TALKGLDLSV EAAPASEYVA KFKEAMDDDF NTPEAYSVLF
DMAREINRLK VDDLAAASAL GVSMKQLGDV LGILEQDVDG FFKGEGSDDE VAQIEALIAE
RNRARTEKDW AAADVARDGL NALGVILEDG PEGTTWRKK
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