| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2506 |
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| Symbol | |
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| ID | 4921352 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2947014 |
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| End bp | 2949371 |
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| Gene Length | 2358 bp |
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| Protein Length | 785 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640164097 |
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| Product | ATP-dependent protease La |
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| Protein accession | YP_001094631 |
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| Protein GI | 127513434 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0466] ATP-dependent Lon protease, bacterial type |
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| TIGRFAM ID | [TIGR00763] ATP-dependent protease La |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000773513 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.491127 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTTAG AGCGTGAAGC GCGAATCGAA CTCCCGGTAC TGCCATTGAG AGACGTGGTG
GTTTACCCCC ATATGGTTAT TCCCCTGTTT GTCGGTCGGG AAAAATCTAT TCGCTGCCTG
GAAGCGGCGA TGGAGCAAGA TAAGCAGATT ATATTAGTGG CCCAGCGCGA TGCTGAATTA
GATGAGCCGA CCAGCGATGA TATCTTCGAG GTCGGAACCG TCGCCTCTAT CTTGCAATTG
CTCAAACTGC CTGACGGCAC AGTGAAGGTG CTGGTCGAAG GTGGCCAGCG TGCCCGTATC
GACAAGTACA CTCAAGAAAC CGAATTTTTT GTGGCGACCG CCCAATACCT CGAGTCGGAA
GAACTTGCCG ATAAGGAAGA GGAGGTATTG GTGCGATCGG CCATCGGTCA GTTCGAAGGT
TATATCAAGC TAAACAAGAA GATCCCGCCA GAGGTCTTAA CCTCACTGTC GGGGATCGAT
GAAGCCGCGC GCCTTGCCGA TACCATGGCG GCCCATATGC CACTTAAGCT TGAAGATAAG
CAGGCGGTGC TGGAGATGGT TAACGTCTCC GAGCGCCTCG AATATCTGAT GGCCATGATG
GAGTCGGAGA TCGATCTGTT GCAGGTGGAG AAGCGCATTC GCTCCCGCGT CAAGAAACAG
ATGGAGAAGA GCCAGCGCGA GTATTATCTC AATGAGCAGA TGAAGGCAAT TCAGAAGGAG
CTTGGGGATA TCGACGAGTC TCACGACGAG TTCGAGACCC TGACCCGTAA GATTGAAGAA
GCCGGCATGC CGAGCGAGGC CAAAGAGAAG GCCACCGCCG AGCTCAACAA GCTGAAGATG
ATGTCACCTA TGTCGGCCGA AGCTACTGTG GTGCGTAGCT ATGTGGACTG GATGATCTCT
GTGCCCTGGA AGCAGCGCTC TAAGATCAAG CGCGATCTCG CCAAGGCCCA GGATGTGCTG
GACACTGATC ACTATGGTCT GGAAAAGGTT AAAGAACGCA TCCTCGAGTA TCTGGCGGTG
CAGAGCCGTG TTAAACAGCT TAAGGGACCT ATCCTGTGTC TCGTGGGCCC ACCGGGTGTG
GGTAAGACCT CTCTGGGGCA ATCTATCGCC AAGGCGACCG GTCGTAAGTA TGTGCGCGTA
GCGCTAGGCG GCGTGCGAGA TGAGGCGGAG ATCCGCGGTC ATCGCCGTAC CTATATCGGC
TCAATGCCAG GTAAGGTGAT CCAGAAGATG TCTAAGGTTG GCGTGAAGAA CCCGCTCTTC
CTGCTTGATG AGATCGATAA GATGAGCAGC GACATGCGTG GTGACCCGGC GTCGGCATTG
CTTGAGGTGT TAGACCCTGA GCAGAATGCG ACTTTTAGCG ATCACTACCT TGAAGTCGAT
TACGATCTGA GCGATGTGAT GTTCGTGGCG ACCTCTAACT CGATGAACAT ACCTGGCCCG
CTACTCGACC GTATGGAAGT GATTCGTCTG TCGGGTTACA CCGAAGATGA GAAGCTCAAC
ATCGCTAAGC AGCATCTGTT GCCTAAACAG ATCGAGCGTA ACGGCCTCAA GGCCAGCGAA
GTCAACGTCG ATGAGAGCGC CATTATCGGC ATCATCCGCT ACTACACCCG CGAAGCCGGT
GTGCGTGCAC TTGAGCGCGA GCTGTCTAAG ATCTGCCGTA AGGTCGTTAA ACAGATCCTG
CTGGATAAGT CGGTGAAGCA TGTGGATGTC AACCAAGACA ACCTCAAGTC TTTCCTCGGC
GTGCAGCGCT TCGACTACGG CAAGGCCGAG TCGAACAACC AGATTGGACA GGTGACAGGC
CTTGCCTGGA CCGAAGTGGG TGGCGATCTG CTGACCATCG AGGCCACCTC TGTGCCGGGT
AAGGGCAAGC TGACCTATAC TGGCTCTCTG GGTGACGTGA TGCAGGAGTC GATTCAGGCG
GCCATGACTG TGGTACGTGC CCGCGCCGAG CAGCTGGGCA TCAACCCAGA CTTCTATGAG
AAGCGCGACA TTCACGTGCA CGTGCCTGAA GGGGCGACGC CGAAAGACGG TCCTTCTGCC
GGTGCGGCCA TGTGTACCGC TTTGGTTTCT AGCCTGACAG GCAACCCGGT GCGTGCCGAT
GTGGCCATGA CGGGTGAGAT CACCCTGCGC GGTGAGGTCT TGCCAATCGG CGGCCTGAAA
GAGAAGCTGC TGGCGGCCCA TCGCGGCGGT ACTAAGCTGG TGCTGATCCC TAAGGAGAAC
GAGCGTGACC TTGAGGAAAT TCCGGCCAAT GTGGTGGCCG ACCTTGAGAT CAGACCCGTA
CGTTGGGTGG ATGAGGTGCT TAAGCTGGCG CTAGAACGAC CAATCGAAGG CTTTGAAGTT
GTTAAAAATT TGGTCTAA
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| Protein sequence | MTLEREARIE LPVLPLRDVV VYPHMVIPLF VGREKSIRCL EAAMEQDKQI ILVAQRDAEL
DEPTSDDIFE VGTVASILQL LKLPDGTVKV LVEGGQRARI DKYTQETEFF VATAQYLESE
ELADKEEEVL VRSAIGQFEG YIKLNKKIPP EVLTSLSGID EAARLADTMA AHMPLKLEDK
QAVLEMVNVS ERLEYLMAMM ESEIDLLQVE KRIRSRVKKQ MEKSQREYYL NEQMKAIQKE
LGDIDESHDE FETLTRKIEE AGMPSEAKEK ATAELNKLKM MSPMSAEATV VRSYVDWMIS
VPWKQRSKIK RDLAKAQDVL DTDHYGLEKV KERILEYLAV QSRVKQLKGP ILCLVGPPGV
GKTSLGQSIA KATGRKYVRV ALGGVRDEAE IRGHRRTYIG SMPGKVIQKM SKVGVKNPLF
LLDEIDKMSS DMRGDPASAL LEVLDPEQNA TFSDHYLEVD YDLSDVMFVA TSNSMNIPGP
LLDRMEVIRL SGYTEDEKLN IAKQHLLPKQ IERNGLKASE VNVDESAIIG IIRYYTREAG
VRALERELSK ICRKVVKQIL LDKSVKHVDV NQDNLKSFLG VQRFDYGKAE SNNQIGQVTG
LAWTEVGGDL LTIEATSVPG KGKLTYTGSL GDVMQESIQA AMTVVRARAE QLGINPDFYE
KRDIHVHVPE GATPKDGPSA GAAMCTALVS SLTGNPVRAD VAMTGEITLR GEVLPIGGLK
EKLLAAHRGG TKLVLIPKEN ERDLEEIPAN VVADLEIRPV RWVDEVLKLA LERPIEGFEV
VKNLV
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