| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2475 |
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| Symbol | |
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| ID | 4921143 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2910241 |
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| End bp | 2910645 |
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| Gene Length | 405 bp |
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| Protein Length | 134 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640164065 |
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| Product | biopolymer transport protein ExbD/TolR |
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| Protein accession | YP_001094600 |
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| Protein GI | 127513403 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0848] Biopolymer transport protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.71842 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000457301 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCACGTA AAAAGCATTC AAGTATAGAA GAAGAAGCGC AAATTGATAT GACACCGATG
CTCGACATCG TGTTTATCAT GTTGATCTTC TTTATCGTAA CAACGTCGTT CATTAAGCCA
TCTGGTCTTG ACTACAACAA GCCAGAGGCT TCTCAAGCGA CAACTCAGAA GTCGGCAAAC
ATCTTTATCG GTGTGAGCAA GACAGGCGTG ATCAAGATGG AGAACCGTCA GGTTGACATC
GAGCGTGTAA CAGCAAACGT TGAGCGTATG CTGGCTGAAT CACCAGAAGC GGCTGTATTG
ATCGAAGCAG ATAAAGAAGC TGAACACGGC ATTGTTGTTA AGGTTATGGA CAATGTGAAG
AAAGCTGGGA TCAACAAGAT TTCGGTATCA GCGGGGAAAG ACTAA
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| Protein sequence | MARKKHSSIE EEAQIDMTPM LDIVFIMLIF FIVTTSFIKP SGLDYNKPEA SQATTQKSAN
IFIGVSKTGV IKMENRQVDI ERVTANVERM LAESPEAAVL IEADKEAEHG IVVKVMDNVK
KAGINKISVS AGKD
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