| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2474 |
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| Symbol | |
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| ID | 4921142 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2909622 |
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| End bp | 2910239 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640164064 |
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| Product | TonB family protein |
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| Protein accession | YP_001094599 |
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| Protein GI | 127513402 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.945787 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000507957 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTGAGAG GAATAGTATC ATTATTAGTT GGTGGTGCTG TTACTTTCGC CCTGTTTGTT
TTCATGGCCT TCTTGGTCGG TGGCGGCGCG AAACGCGCCG ACACTGCCAC TGATTCTCCG
GTTATTGAGA TCAGTATGGA TAAACAGGAT ACGAAAGTGC AGGACAAGCC AAGGGTTAAA
CCTAAGCCAC CTACACCGCC TGAGCAGCCA CCTTTACCAG ATACGCCACC GCCTGATAGC
TCATCAGACA TCGACACTAA CATGTCTTTC AACATGACTG GTGTAGTAGC AGGTGCAGCA
TCTACCGGCT TTAAGCTGGG TAACATGATG ACTCGTGACG GTGATGCAAC ACCTATCGTT
CGTATCGAGC CACAGTACCC GATTGCTGCA GCGCGTGACG GTAAGGAAGG TTGGGTTCAA
CTTAGCTTTA CCATCAACGA ACTTGGTGGT GTAGAAGATG TGCAAGTGAT CAACGCCGAT
CCTAAGCGTA TCTTCGACAA AGAAGCTAAG CGTGCACTGA AGAAGTGGAA GTACAAGCCA
AAGATTGTTG ACGGTAAAGC CCTTAAGCAA CCTGGTATGA CTGTACAACT AGACTTTAAA
CTTGATGGAG GCAAATAG
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| Protein sequence | MLRGIVSLLV GGAVTFALFV FMAFLVGGGA KRADTATDSP VIEISMDKQD TKVQDKPRVK
PKPPTPPEQP PLPDTPPPDS SSDIDTNMSF NMTGVVAGAA STGFKLGNMM TRDGDATPIV
RIEPQYPIAA ARDGKEGWVQ LSFTINELGG VEDVQVINAD PKRIFDKEAK RALKKWKYKP
KIVDGKALKQ PGMTVQLDFK LDGGK
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