| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2451 |
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| Symbol | |
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| ID | 4921496 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2881033 |
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| End bp | 2882064 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640164041 |
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| Product | patatin |
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| Protein accession | YP_001094576 |
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| Protein GI | 127513379 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000295185 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGGTTTGGC TTATGATGAA AACTAAAGAC ATTAAGACGC GGCTTGCTCA AGCGGCTCGC
GTCCCAGGGA GAGTAACAGA GAAGATGGCG AATATCGGCA TTGCACTGGG CAGTGGTGCG
GCGAAAGGAT GGGCCCACAT AGGGGTGCTA AACGAGCTGG CGAACATGGG AGTCTTTCCC
AATAAGGTGG CCGGCTGCTC TATCGGCGCC GTGGTGGGCG CCGCCTATGC GCAAGATAAC
CTTAACGATC TACAGGCCTG GGTGACCAGC TTTTCCAGCT GGGATGTGCT GGGCCTGATG
GATCTGAGCT GGCGCAAGGG CGGGCTAATT GGCGGCGAGA AGGTGTTCGA CGTGATGCAG
CAGCATATCG GCAATCTGGA TATCGAACAG ATGCAGATGC CCTTTGCGGC GGTGGCGACC
GATCTCTATA CCGGCCAGGA GATCTGGTTC AAGCAGGGTA GCCTGCGTCA TGCGGTGCGA
GCCTCCTGCT CCATGCCGGG GATCTTGCCG CCGGCGCGTA TTGGCGAGCG CTGGCTGGTG
GATGGCGCCG TGGTTAACCC TGTGCCCGTG TCGGTGAGCC GTGCAATGGG CGTCGACCTG
GTGATTGCCG TGGATCTTAA CGCTCACAGG AAGACCCGCC ATCAGCAGCT GCCCGTGGCC
ATCTCTTCCG ATGTGAAGGC CAGTCAGGCA GAGCAGGTGA AAGCCGAGAA GGAACTGGAG
AGCGGCTTTA TGGATCTCTT GGCCCGGGGA CGGGATTATG TCAGCGGCTT GACCGATAAG
TTTTCCCTCG GTAATCGCAG TGAGCCAGGC ATGTTGGCGG TGATGTCTCA GTCGATGGAT
ATCCTGGAGC AGCGCCACAA GCGGGTGCGC CTGATGGGGG ATCCACCGGA TATCTTGATC
ACCCCTAACG TGATGGAGAT TGGCACCATG GAGTTCCATC GCGCGGGCGA GGCGATCGAG
GCGGGACAAG AGGCGGTTAA GCAGGTGGCT CATATTATCC GCGCCCGTAT CGATGAGCTT
GAGCGTCACT GA
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| Protein sequence | MVWLMMKTKD IKTRLAQAAR VPGRVTEKMA NIGIALGSGA AKGWAHIGVL NELANMGVFP
NKVAGCSIGA VVGAAYAQDN LNDLQAWVTS FSSWDVLGLM DLSWRKGGLI GGEKVFDVMQ
QHIGNLDIEQ MQMPFAAVAT DLYTGQEIWF KQGSLRHAVR ASCSMPGILP PARIGERWLV
DGAVVNPVPV SVSRAMGVDL VIAVDLNAHR KTRHQQLPVA ISSDVKASQA EQVKAEKELE
SGFMDLLARG RDYVSGLTDK FSLGNRSEPG MLAVMSQSMD ILEQRHKRVR LMGDPPDILI
TPNVMEIGTM EFHRAGEAIE AGQEAVKQVA HIIRARIDEL ERH
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