Gene Shew_2448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_2448 
SymbolnrdG 
ID4921604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp2877102 
End bp2877575 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content57% 
IMG OID640164038 
Productanaerobic ribonucleotide reductase-activating protein 
Protein accessionYP_001094573 
Protein GI127513376 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0602] Organic radical activating enzymes 
TIGRFAM ID[TIGR02491] anaerobic ribonucleoside-triphosphate reductase activating protein 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000191656 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAACTATC ATCAATATTT TCCTATCGAC GTGGTCAATG GACCCGGCAC CAGGGCGACC 
CTGTTTGTCT CGGGCTGCGA GCATCAGTGC CGTGGCTGCT ACAACCAGTC GACCTGGAAT
CCTGACTCGG GCCATCTGTT CGACGAGGCT ATGCTCGAGC AGGTGATTAA GGATCTCAAT
GATACCCGCA TTGTGCGCCG CGGCCTGTCG CTCTCTGGCG GCGACCCGCT ACATCCGGGC
AATCTCGATG TCATTCTGAC TCTAGTGAAA CGGGTAAGGC AGGAGTGCCG GGGCAAGGAT
ATCTGGCTGT GGACCGGCTA TAGACTCGAT GAACTCAGCC CGGCCCAACA AGCGGTTATC
GCCCATGTGG ACGTGCTGGT GGATGGCAAG TTTGAGCAGT CGCTCGCCGA TCCCAGTCTG
GTGTTTCGCG GCAGCAGCAA TCAGGTTATT CACTATCTCA CCGACAAGCG CTGA
 
Protein sequence
MNYHQYFPID VVNGPGTRAT LFVSGCEHQC RGCYNQSTWN PDSGHLFDEA MLEQVIKDLN 
DTRIVRRGLS LSGGDPLHPG NLDVILTLVK RVRQECRGKD IWLWTGYRLD ELSPAQQAVI
AHVDVLVDGK FEQSLADPSL VFRGSSNQVI HYLTDKR