Gene Shew_2444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_2444 
Symbol 
ID4921600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp2874607 
End bp2874987 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content55% 
IMG OID640164034 
Producthypothetical protein 
Protein accessionYP_001094569 
Protein GI127513372 
COG category[S] Function unknown 
COG ID[COG4628] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.035682 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000018391 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGGCCAAA TTTTTTACTC AGCGATCACC ATGACTCAGG CGAATAACCC ACTACACGGC 
ATCAAACTCG AAGCCCTACT CACAGACCTC GTCGACCACT ACGGCTGGGA AGAGCTTGGC
AGACGCATCG ACATACGCTG CTTTAACCAC GACCCATCCA TAAAATCCAG CCTCAAGTTC
TTGCGTAAGA CGCAATGGGC CAGGGAAAAG GTGGAGCGCC TCTACCTCAA GATGATTGGC
GAGCCTATCC CGGCGCACCT ACGCGGCGAT GCCGGTCGTC CTATAGATGC CCCCAAGCCT
AAACGCACCA CTGGCGATGA GGCGGAAAGC TCAGGCACCA GCGGCGTCAA CCAACATATT
TGGGGTAAAA CTGACGACTA A
 
Protein sequence
MGQIFYSAIT MTQANNPLHG IKLEALLTDL VDHYGWEELG RRIDIRCFNH DPSIKSSLKF 
LRKTQWAREK VERLYLKMIG EPIPAHLRGD AGRPIDAPKP KRTTGDEAES SGTSGVNQHI
WGKTDD