| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2436 |
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| Symbol | |
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| ID | 4921657 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2863837 |
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| End bp | 2865153 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640164026 |
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| Product | aromatic hydrocarbon degradation membrane protein |
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| Protein accession | YP_001094561 |
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| Protein GI | 127513364 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2067] Long-chain fatty acid transport protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000365967 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00491561 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGCGTT TCAACAAGAC AATACTCGCA GTAGCCGTCA CACTCGCTAG CTCACAGGCG
ATGGCCGCCG GTTTCCAACT CAACAGCCAG TCAGCCACTG GTGTCGGCCG TGCATTTGCC
GGTGATGCCG TCATCGCTGA CAACGCCTCA GTGCTGTCTC GCAACCCAGC GGCTATGGCC
CTGTTTGACG AGAAGCAACT TTCTATGGGC CTGACCTACG CCGATGTCGA AGTCAGCGTG
AAAGATGTTT ACATCGACTC GCTAGTGGGC CCGATCCACT ATGGTCATGT GGACGATGCG
GCAGAAGCCA AGATCATCCC TAACTTCTAC TATGTCAGCC CGGTAAACGA CAAGTTTGCC
TATGGCGTTG CCATGTTCAG CAACTTCGGC ACAGGCACAG ACACGACCCC TATGTCACAG
CAGCTGGTTA ACGGCCTGCC TGCCCCGCTG GATCTTTTGG GTAAGACAGA AGTGACCACG
CTCAACTTTA ACCTGAGCGC CTCTTACCGC TTTAACGACC ACTTCAGCGT CGGCGCCGGC
GTCGATGTGA TCTATGGCCA AGGCACCCTG ACCCGCGGCG GTTTGGTACC GACTCAAGCC
GGTGCAGTAC AGCAAGATCT TGTGGATGTT GACGCCGACG GCGTAGCATT CGGCGGCATC
ATAGGCGCAG TGTATGAGAT CAACGCCGAT CACAGATTCG GTATGAGCTA CCGTTTCAGC
CCAGATTTCA AGGCGACAGG CGACATCAAC ATGTATAACC CAGTTGCCGG TGCCAACGTC
GCCTTCGATG AGATCAACAT CCCTATGCCG GATATCTTCC AGGTGGCGGG TTTCCATCAG
CTGACCGAGA AGTTTGCCCT GCACTACACG GCGCAGCTGA CCACTTGGGG CGATTTCAAA
GAGATCACAG TGACCGACGG CACCATAGGC GGCGTGCCTG TAGCACCTGA GGCTAGCCTC
AAGACCTACG CCTGGGACGA CTCTTGGCTG TTCAGCGTCG GCGGCACCTA CACCCTCAAT
CAGGACTGGA CAGTGCGCGC CGGTTATATG TTTGACCAAG GCGTCGTTGG CGAAGTCAGC
TCTATCTCCA TCCCTGACTC TGACCGTCAG TGGTTCACCG CCGGTGCGAC CTATAACCTG
GGTAAGCACG CTAGCCTGGA CTTCGGTGTC GCCTTCATCC GTGGTGAAGA TGTAGATCTT
ATCGAGCACA GCGCCATCAC AGGCGGTCTG CCAATCGGTC CTGATACCGG CATGGTTCAC
GCGACCACAC GCTCGAATGC CACTTACTAC TCTATGCAGT ACAACTACAA GTTCTAA
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| Protein sequence | MKRFNKTILA VAVTLASSQA MAAGFQLNSQ SATGVGRAFA GDAVIADNAS VLSRNPAAMA
LFDEKQLSMG LTYADVEVSV KDVYIDSLVG PIHYGHVDDA AEAKIIPNFY YVSPVNDKFA
YGVAMFSNFG TGTDTTPMSQ QLVNGLPAPL DLLGKTEVTT LNFNLSASYR FNDHFSVGAG
VDVIYGQGTL TRGGLVPTQA GAVQQDLVDV DADGVAFGGI IGAVYEINAD HRFGMSYRFS
PDFKATGDIN MYNPVAGANV AFDEINIPMP DIFQVAGFHQ LTEKFALHYT AQLTTWGDFK
EITVTDGTIG GVPVAPEASL KTYAWDDSWL FSVGGTYTLN QDWTVRAGYM FDQGVVGEVS
SISIPDSDRQ WFTAGATYNL GKHASLDFGV AFIRGEDVDL IEHSAITGGL PIGPDTGMVH
ATTRSNATYY SMQYNYKF
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