| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2402 |
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| Symbol | |
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| ID | 4921792 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2817719 |
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| End bp | 2818459 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640163992 |
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| Product | ABC transporter-related protein |
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| Protein accession | YP_001094527 |
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| Protein GI | 127513330 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4181] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAGAAA ATAGTGCTAT CAAGGTCAGT GATCTCTATA AATCGGTAAC TACCCAAGAG
GGAGAGCTTA CTATCCTCAA TGGCATCAAT CTGGATGTCA AGTCGGGGGA GAGTGTGGCG
ATTCTTGGCC CCTCGGGTTC GGGTAAGTCG ACCCTGCTCG GACTGCTGGC GGCGCTCGAC
TCGCCCACCA AGGGGGAGAT AGTCCTCGAT GGCGTGACCC TCAATGGTTT GGATGAGGAA
GGCAAGGCCG CACTGCGTAA ACAGAAAGTC AGCTTTATCT TTCAGTCTTT CATGCTGGTC
GATACCCTCA ACGCCCTGGA GAACGTCATG CTACCGGCCG AGCTATCTGG GATCAGTAAC
GCCAAGCAGA AGGCGCAGCA GATGCTCGAG CGTGTGGGCC TAAGCCACAG ACTCAACCAT
TTCCCCAACC AGCTCTCAGG CGGCGAGCAG CAGCGTGTCG CCATCGCCAG GGCCTTCATC
TGTGAGCCTA AGGTGCTGTT TGCCGACGAG CCGACGGGAA ACCTGGATGG GGCCAACAGC
GACAGGGTGG CGGACATGCT GTTTGAGCTC AACCGCGAGA GTGACACCAC CCTGGTGCTG
GTGACCCATG ATCTCCAGCT GGCCAATCGT TGTCAGCGCC GCCTGAACAT GCAGGCGGGG
CAGTTAAGTG AGGTGATGAG CGAAACTGAC AACAGCGGCG AGCAAGAGAT GGCCCGTTCG
AGCGCAGCGG AGGCGAGTTA A
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| Protein sequence | MLENSAIKVS DLYKSVTTQE GELTILNGIN LDVKSGESVA ILGPSGSGKS TLLGLLAALD
SPTKGEIVLD GVTLNGLDEE GKAALRKQKV SFIFQSFMLV DTLNALENVM LPAELSGISN
AKQKAQQMLE RVGLSHRLNH FPNQLSGGEQ QRVAIARAFI CEPKVLFADE PTGNLDGANS
DRVADMLFEL NRESDTTLVL VTHDLQLANR CQRRLNMQAG QLSEVMSETD NSGEQEMARS
SAAEAS
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