Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_2380 |
Symbol | |
ID | 4921444 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 2785909 |
End bp | 2786682 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640163970 |
Product | putative sulfate transport protein CysZ |
Protein accession | YP_001094505 |
Protein GI | 127513308 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2981] Uncharacterized protein involved in cysteine biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0944134 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000158699 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATCAAA AAGCAAGCAA GCCCGCTAAG AGTGGCGTGA ACTATTTTCT CGACGGCTTT CGGCTGATCA AACAACCGGG GCTGAGACGC TTCGTCTTCA TCCCGCTGAG CGTCAACCTG GTGCTGTTTG CGGCGGTGAT CTACTTCGCC ATCGGCCAGC TGGAGCAGGT GTTTCAATGG ATCAATGGTC AACTGCCAGA GTACCTGAGC TGGCTGAACT TCCTGCTCTG GCCGCTGGCG GTGCTCACCC TCTTGGTGGT GCTCTCCTTT ATCTTCAGCT CCGTCATGAA CTGGATAGCC GCCCCCTTCA ACGGCCTGCT GGCGGAGAAG GTTGAGCAGT ATCTCACCGG CAAAGACCTC AATACCGGCG GCACCATAGA TTTGATTAAA GATCTGCCAC GCATCCTGGG GCGCGAGTGG ATAAAACTGA AATATTACCT GCCCAGAGCC ATATTGTTTC TCATCCTCTT CTGGGTGCCT TTTATCGGCC AGACCGCCGC GCCTGTGCTC TGGTTCCTGT TTAGCGCCTG GATGATGGCG ATCCAATACT GTGACTATCC CTTCGATAAC CACAAGGTGC CTTTTAATGA TATGAAGTTT GCCCTCAATC AGACCAAGGG CAGCAGCTTT AGCTTCGGCG CAGCGGTGAC CCTGTTTTCG ATGATCCCCA TTATCAACTT TATCGTGATG CCGGTCGCCA TCTGTGGCGC CACCTCTATG TGGGTCGACA AATACCGCGC CGCCTATCGC AATGAGCAGA TTGCGCCTGA ATAA
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Protein sequence | MNQKASKPAK SGVNYFLDGF RLIKQPGLRR FVFIPLSVNL VLFAAVIYFA IGQLEQVFQW INGQLPEYLS WLNFLLWPLA VLTLLVVLSF IFSSVMNWIA APFNGLLAEK VEQYLTGKDL NTGGTIDLIK DLPRILGREW IKLKYYLPRA ILFLILFWVP FIGQTAAPVL WFLFSAWMMA IQYCDYPFDN HKVPFNDMKF ALNQTKGSSF SFGAAVTLFS MIPIINFIVM PVAICGATSM WVDKYRAAYR NEQIAPE
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