Gene Shew_2378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_2378 
Symbol 
ID4921905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp2781264 
End bp2782271 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content55% 
IMG OID640163968 
Productcell division protein ZipA 
Protein accessionYP_001094503 
Protein GI127513306 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG3115] Cell division protein 
TIGRFAM ID[TIGR02205] cell division protein ZipA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.17796e-07 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value1.27891e-06 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGAAAATT TGCAACTGGT ATTGTTCGTG TTAGGCGCGG TAGCCATTAT CGCGGTACTT 
GTGCATGGTT TTTGGTCCAT TAGGCGGCAG CAACCTAAAT CATTAAAAGA ATCGCCCATG
ACAGGGCTAT ACACAGATAA GACACGTGAC AGTGACGGTT TCGACGCCGA TGGCGTTGGC
CCTGTAAGAG TCGTTAAAAA CAACGCAGAG CAAGGCATTC CCAAGGCCAC CTCGACCAGT
CGTGCCACAC CTTTTGGTGC ACGCGCGCAA GAGAGCGAGC CAGCAGATGT CTCGCCTAGC
TTCTCCCTGT CGGATGAGCC TAAGCAGAAG GCGCCGCGTT CGCGTCAAGA GCCGGTGATG
TCGGCCACTC CTAACGAGGA AGTTAGCGAC GCCCATCTCG AGCAGATGGA GCTTGGCCTG
GGTCAGGCTC CGGCGCAGCC TTCGCTGTTT GAAGATCCGG TTACCGAGCG TAAGCAGGAA
GCAGTGCGTC CCGCACCGAG AGTCGAAGCG CCTCAGTCAG TAGCGCCTGC GTCTGTAGAG
CCAGTGTCTG TTGAACCAGA GCCAGCGCCA AAAGTGGCCG AAGAGACGCC GCTTGGCGAT
CCACAGGATG TATTGGTGCT GCACGTGGTG GCTAAAGAGG GTGAGGCCCT TAATGGCGCC
GAGCTGCTAC CTAGCCTGCT AACCCTCAAC TTCAAGTTTG GCGATATGGA TATTTTCCAT
CGTCATGAGG ATAATGCTGG TACAGGCAAG GTGCTGTTTT CATTGGCTAA CATGGTTAAG
CCTGGGGTAT TCAACCCAGA TGAGATGGAG CAGTTTACCA CTCAGGGCAT AGTGCTTTTT
ATGACGCTGC CTTGTTATGG CGATCCTCTG ATGAATTTCT CCATCATGCT TAACTCGGCC
CATCAGCTTG CCGATGATCT AGGCGGCGAA GTGCTCGACG GTGGTCGCGG CGCCTGGAGC
GAGCAGACCA AACAGTCTTA CCTGCAGCGC ATTCGCGCGC AGATGTGA
 
Protein sequence
MENLQLVLFV LGAVAIIAVL VHGFWSIRRQ QPKSLKESPM TGLYTDKTRD SDGFDADGVG 
PVRVVKNNAE QGIPKATSTS RATPFGARAQ ESEPADVSPS FSLSDEPKQK APRSRQEPVM
SATPNEEVSD AHLEQMELGL GQAPAQPSLF EDPVTERKQE AVRPAPRVEA PQSVAPASVE
PVSVEPEPAP KVAEETPLGD PQDVLVLHVV AKEGEALNGA ELLPSLLTLN FKFGDMDIFH
RHEDNAGTGK VLFSLANMVK PGVFNPDEME QFTTQGIVLF MTLPCYGDPL MNFSIMLNSA
HQLADDLGGE VLDGGRGAWS EQTKQSYLQR IRAQM