| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2336 |
|---|
| Symbol | |
|---|
| ID | 4922063 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | - |
|---|
| Start bp | 2730216 |
|---|
| End bp | 2730491 |
|---|
| Gene Length | 276 bp |
|---|
| Protein Length | 91 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640163921 |
|---|
| Product | preprotein translocase, YajC subunit |
|---|
| Protein accession | YP_001094461 |
|---|
| Protein GI | 127513264 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1862] Preprotein translocase subunit YajC |
|---|
| TIGRFAM ID | [TIGR00739] preprotein translocase, YajC subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000343241 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACTGG TTTTCATGCT GGTCATTTTC GGTCTGATCT TTTACTTCAT GATTTTCCGT
CCGCAATCTA AGCGTGTAAA AGAACATAAG AACCTGATGA GCTCGTTGAG CAAGGGTGAT
GAAGTGCTCA CTAGTGGTGG GATCTTGGGT AAGATCGCTA AGATCAGCGA TGACAACGAT
TATGTGTTGC TGACGATCAA CGAAACCTCA GAAATCACAA TCAAGAAGGA TTACATAGCG
GCTGTTTTGC CTAAAGGGTC TATTAAGTCA CTTTAA
|
|---|
| Protein sequence | MELVFMLVIF GLIFYFMIFR PQSKRVKEHK NLMSSLSKGD EVLTSGGILG KIAKISDDND
YVLLTINETS EITIKKDYIA AVLPKGSIKS L
|
|---|
| |