| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2319 |
|---|
| Symbol | |
|---|
| ID | 4922169 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | - |
|---|
| Start bp | 2714471 |
|---|
| End bp | 2715292 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640163904 |
|---|
| Product | serine O-acetyltransferase |
|---|
| Protein accession | YP_001094444 |
|---|
| Protein GI | 127513247 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1045] Serine acetyltransferase |
|---|
| TIGRFAM ID | [TIGR01172] serine O-acetyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0101621 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGTGA TTTCCAGAAT TAAAGATGAC ATAGCCTCCA TCTATCACAG AGACCCGGCG
GCAAACGGTA CCCTAGAGAT CCTGCTCAAC TACCCTGGTA TGCAGGCGAT TTGGATCCAC
CGTGTCAGCC ATAAGCTTTG GAAGGCCAAG TGGTGTCTCA CCGCGCGCAT GATCTCAACT
TTCTCCCGTT GGCTGACCGG GGTGGAGATC CATCCTGGTG CCACCATAGG CGACCGTTTC
TTTATCGACC ACGGCATGGG TGTGGTGATA GGGGAGACCG CCGAGATAGG CAACGATTGT
ACCCTATACC ATGGCGTGAC CCTGGGGGGA ACGACCTGGC AGGCGGGTAA ACGTCACCCG
ACCCTGGGCA ACAATGTAGT AGTGGGCGCA GGCGCTAAGA TCTTGGGGCC GATCACCATG
CACGATGGGG CGCGTGTCGG CTCTAACTCT GTGGTGGTCA AAGAGGTACC TAAAGATACT
ACTGTGGTGG GGATCCCCGC CCGTGAGGTG GCCAGACCCA GCGAAGAGGC CAAGGAGCAT
GTTCAGCGCC GCACCGAGAT GGCCAAGAAA TATGGCTTCG ATGCCTACGC GGTATCGCCC
GATAATCCAG ACCCTGTGGC CAATGCCATC GGCAAGATGC TGGATCATAT GCACCTGATG
GATTCTAAGG TGCAAGAGGT GTGTCAGGCC GTGCAGAGCA TGGGCGGCAG CGTCTGTACC
GAGCGCCTTC CCGAGCTTGA AGTGGGTGAG TTTAGCGACG CCGAGCAGGC CGCGGCCGAG
AAGCGCCAGC AGGCGATAGA TGAGTTTGAT CCCATTATTT AA
|
|---|
| Protein sequence | MGVISRIKDD IASIYHRDPA ANGTLEILLN YPGMQAIWIH RVSHKLWKAK WCLTARMIST
FSRWLTGVEI HPGATIGDRF FIDHGMGVVI GETAEIGNDC TLYHGVTLGG TTWQAGKRHP
TLGNNVVVGA GAKILGPITM HDGARVGSNS VVVKEVPKDT TVVGIPAREV ARPSEEAKEH
VQRRTEMAKK YGFDAYAVSP DNPDPVANAI GKMLDHMHLM DSKVQEVCQA VQSMGGSVCT
ERLPELEVGE FSDAEQAAAE KRQQAIDEFD PII
|
|---|
| |