| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2317 |
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| Symbol | |
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| ID | 4922167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2712521 |
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| End bp | 2713735 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640163902 |
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| Product | cysteine desulfurase |
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| Protein accession | YP_001094442 |
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| Protein GI | 127513245 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
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| TIGRFAM ID | [TIGR02006] cysteine desulfurase IscS
[TIGR03402] cysteine desulfurase NifS |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.459864 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTTC CTATTTATTT AGATTACGCT GCTACGACGC CGGTCGATCC GCGCGTGGCA
GAGAAAATGA TGCAATACAT GACGATGGAC GGGATTTTTG GTAACCCCGC TTCACGTTCT
CACCGTTACG GCTGGCAGGC CGAAGAGGCG GTGGATATCG CCCGTAACCA GGTCGCCGAG
CTGATCAACG CCGATCCACG CGAGATCGTG TTCACCTCGG GTGCAACCGA GTCTGACAAC
CTGGCCATCA AGGGTGTTGC GCATTTTTAT CATAAGAAAG GCAAGCACAT CATCACCAGT
AAGACAGAAC ATAAGGCCGT GCTGGACACC TGTCGTCAGC TAGAGCGTGA AGGCTTCGAG
GTGACTTACC TTGAGCCAGA GTCAAACGGC ATCATCCCTA TCGAGAAGCT CGAAGCGGCG
ATGCGTGAAG ACACCATACT GCTCAGCCTG ATGCATGTTA ACAACGAGAT CGGCGTGATC
CACGATATCG ACGCCATTGG CGAGCTATGC CGTGCCAAGA AGGTGATTTT CCACGTGGAT
GCGGCACAAA GTGCCGGCAA GCTACCTATC GACCTGCAAA AGAGCAAGGT TGATTTGATG
TCAATCTCGG CGCACAAGAT GTACGGCCCT AAAGGCATTG GCGCCCTGTA TGTGCGTCGT
AAGCCACGTA TTCGTCTGGA AGCGACTATG CACGGTGGTG GACACGAGCG CGGCATGCGC
AGTGGTACCC TGGCGACTCA CCAAATTGTG GGCATGGGTG AAGCGGCGGC GATTGCCAAG
GCCGACATGG AAAGCGATAA CGCCCGTATC CGTCGTCTGC GCGACAGACT GTGGGACGGC
ATCAAGCATA TCGAAGAAAC CTATATCAAC GGTGATGCAG AGCAAAGATA CTGCGGCAGC
CTGAACGTCA GCTTTAACTT CGTCGAAGGT GAGTCTTTGA TGATGGCGCT GAAAGATCTG
GCGGTCTCTT CTGGTTCTGC CTGTACCTCA GCAAGTTTAG AGCCTAGCTA TGTGCTTCGT
GCATTAGGAT TAGACGATGA AATGGCGCAC AGCTCAATCC GTTTCTCTAT CGGTCGTTTC
ACGACTGAAG AGGAGATTGA CCATGCGATC GAGACCATTA CCAAGTCTAT CGGTCAGTTG
AGAGAGATGT CTCCATTGTG GGAGATGTTT AAAGATGGTG TTGACCTGTC AACAGTGCAG
TGGGCACATC ATTAA
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| Protein sequence | MKLPIYLDYA ATTPVDPRVA EKMMQYMTMD GIFGNPASRS HRYGWQAEEA VDIARNQVAE
LINADPREIV FTSGATESDN LAIKGVAHFY HKKGKHIITS KTEHKAVLDT CRQLEREGFE
VTYLEPESNG IIPIEKLEAA MREDTILLSL MHVNNEIGVI HDIDAIGELC RAKKVIFHVD
AAQSAGKLPI DLQKSKVDLM SISAHKMYGP KGIGALYVRR KPRIRLEATM HGGGHERGMR
SGTLATHQIV GMGEAAAIAK ADMESDNARI RRLRDRLWDG IKHIEETYIN GDAEQRYCGS
LNVSFNFVEG ESLMMALKDL AVSSGSACTS ASLEPSYVLR ALGLDDEMAH SSIRFSIGRF
TTEEEIDHAI ETITKSIGQL REMSPLWEMF KDGVDLSTVQ WAHH
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