| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2308 |
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| Symbol | |
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| ID | 4922158 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2705710 |
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| End bp | 2706726 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640163893 |
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| Product | aspartate-semialdehyde dehydrogenase |
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| Protein accession | YP_001094433 |
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| Protein GI | 127513236 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0136] Aspartate-semialdehyde dehydrogenase |
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| TIGRFAM ID | [TIGR01296] aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000121331 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCAGG AATTTAACGT CGTCGTTTTA GGTGCATCGG GAGCCGTGGG TCAAACAATG
ATTGAGATCC TCGAAGAGCG CAACTTTCCC GTTGCCAACT TGTATCCTTT GGCCAGTAGT
CGTAGTGCGG GCGACACGGT AACTTTCCAT GGTAAACAGG TCGAAATTTT AGATGTGGAG
ACCTTCGATT GGTCTCAGGC GCAGATAGGT TTCTTCTCGG CGGGCGGTGA CGTGTCGGCC
AAGTGGGCAC CTATCGCCGC CGAGCATGGT TGTGTGGTGA TCGATAACAC CTCACACTTC
CGTTACGACA TCGATATCCC TCTGGTCGTT CCCGAGGTGA ACCCACAGGC GATCGCCGAT
TTCCGTAATC GCAACATCAT CGCCAACCCG AACTGTTCGA CTATCCAGAT GCTGGTTGCC
CTTAAGCCTA TCTATGATGC TTATGGGATC TCACGTATCA ATGTGGCGAC CTACCAGTCG
GTATCTGGCT CGGGCAAGCA GGCTATCGAA GAGCTGGCTA ATCAGTGCGC CAAGCTGCTT
CAGGGGCTAC CGGTAGAGCC TAAGGCCTAT CCAAAGCAGA TCGCCTTTAA CGTGTTGCCG
CAGATCGATA AGTTTATGGA CAACGGCTAC ACCAAAGAAG AGATGAAGAT GGTCTGGGAA
ACCCAGAAGA TCTTCGGCGA TGACCAGATA GTGGTTAATC CAACCGCGGT GCGTGTGCCG
GTATTTTATG GTCACTCTGA AGCTGTGCAT ATCGAAACTG TACAGCCGGT GAGCGCCGAG
GATGTTAAGG CCGTGTTGCG TGATGCGCCG GGCGTGGAGC TGTTCGAGTC TAACGAAGAG
TACCCAACGG CGGTGACCGA GGCGGCAGGA ACCGATCCTG TATACGTGGG CCGCGTGCGC
GAAGATATCT CTCATCCTAA CGGCATCAAC CTCTGGGTTG TGTCTGATAA CATTAGAAAA
GGCGCGGCGC TCAACAGCGT GCAGATCGCC GAAGTCTTGG TCAGAGACTA CTACTGA
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| Protein sequence | MSQEFNVVVL GASGAVGQTM IEILEERNFP VANLYPLASS RSAGDTVTFH GKQVEILDVE
TFDWSQAQIG FFSAGGDVSA KWAPIAAEHG CVVIDNTSHF RYDIDIPLVV PEVNPQAIAD
FRNRNIIANP NCSTIQMLVA LKPIYDAYGI SRINVATYQS VSGSGKQAIE ELANQCAKLL
QGLPVEPKAY PKQIAFNVLP QIDKFMDNGY TKEEMKMVWE TQKIFGDDQI VVNPTAVRVP
VFYGHSEAVH IETVQPVSAE DVKAVLRDAP GVELFESNEE YPTAVTEAAG TDPVYVGRVR
EDISHPNGIN LWVVSDNIRK GAALNSVQIA EVLVRDYY
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