| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2301 |
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| Symbol | |
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| ID | 4922294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2695151 |
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| End bp | 2697268 |
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| Gene Length | 2118 bp |
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| Protein Length | 705 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640163886 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001094426 |
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| Protein GI | 127513229 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACACT TGTCCATCAG TACTAAGTTG CTTTGGATCA CCTCAGCGCT GTTTTTGATC
ATAGTCGCCA TCCTCTCCTT CAGCCTCTGG TGGTCGCTCA GCGATAAAAA CGCGCAACTG
GCGGGCCAGG TGCAAGGTGC GCTGCATGAT GAAACTCGCC AGCGCCTCAG TGCCCGGGCC
GGTGAGTATG GCGAGCGGGT GGCGGGTTTT ATCAATGAGG CCTATCGGAT CCCCTTTTCG
TTTGCCGGCA TGATAGAGCA GAGCGCCGCT AGCCAGCCGC TATCCCGAGA AGGGGTAGAG
GAGTCGGTGG CCGGCGTGCT GCGAAAAAAC AGTCAGCTCT CTTCTATGTA TGCCCAGTTT
GAGCCCAACG GCTACGATGG CCGCGACGGC GACTATACCC AGAAGATCAG TCACAGCGTA
CCCGAGGTGG GTACCCTGGA GATCTATTAC ACCCGCAGCG ACGATGGCAG CGTCGAGCAT
CAGCAGGTGG ATGACGCCAG CGAGAAGTAT GATGCCACTC TCAAGGAGTT TGGCGTGCGC
GAGGCCGAAT GGTACCTGTG CGCCAAGGAT ACTAAGCAGC CCTGTCTGAT GGAGCCCTAC
CTGTATGAGA TAAGCCCGGG CAACACGGCG CTGATGACCT CCTTGACCGT GCCTGTGGTG
GTTGGCGGCA GCTTTCGCGG TGTAATCGGC GTGGATGTTA ATTTGCCGGT GTTTCAGAAG
CTGATCGACG AGCTCTCCGC TAGCCTGTAT CAGGGCAAGG CCAAGGTGAC CCTGCTGAGC
CAGAAGGGCT TGGTGGTGGC GGCCAGTCAC TATGATAAGA AGGCGCGGCC ACTGGGCGAG
TCTATCGCCC CGTCGCTCGC CAGTCAGTTG ACCGGGCTGC ATCGCCAGGG CGGTTATCTG
GAGCAGGGCG ATAACATCAT AGTTGCCTAT CCTATCGAGA TCCCGCTCGC CAAGGCGCAG
TGGTCGCTGG TGATTGAGGT GGCCAAGGCC GATGCCTATC AGGCGGCAAA TGCCATGGAT
AAGGCTATGT CGGCGATGGC CAGCTCTCTG GGCAGCCTGC TGCTGATCGT AGGCGTCATC
GTTTCGCTGA TCGCCGTGGT TACCATCAGC CTGGTGATCC GCTCTATTGT CGCGCCGCTG
AAGGTGATTC AGAGCCGGGT GGAAAACTTA GCCAGTGCCG AAGGAGACCT GACTCAGCAG
GTCACAGTGG AGTCCCACGC CGAACTCATC GCCCTGGGCG GTGGCATCAA CGGCTTTATC
AATAAGTTGA GGCTGCTAAT TGGCGAGCTT AAGGAGCTGG CATCACGCTC GCAGGCCGAG
AGTCAGGTGG CGGCGGAGAT AGCCCAGCAG ACTCACAACA GCGTCAATCG TCAGTACAGC
GATATCGAGA GTGTGGTGAC CGCGGTTAAT GAGATGAGCG CCACGGCGCT CGAGGTGGCC
AAGGCATCTG AGCAGACGGC CTCGGAAACC GAAGCCATGA CCCTCAACGT CAAGGCAGGT
GAGGACAGCC TGAGCCAGGC GATGGGCTAT GTGACCCATA TGTCTCAGGA ATCCCTGCTG
GCCAAGGAGG CCGTGGGTAA GGTGGCGGAA AGCAGCACCA ACATCAGCAA GATCCTCGAG
GTGATCAGCG CCATCGCCGA GCAGACCAAT CTGCTGGCGC TTAACGCCGC CATCGAGGCC
GCCCGCGCCG GTGAACAAGG CCGGGGCTTC GCCGTGGTCG CGGATGAGGT ACGCGCGTTG
GCCTCCAAGA CCCAGAGTTC GACCGATGAG ATAGGCAAGT TGATCGAGGC GCTGCAGCGT
GAGGTCAACA GCGCCTCGCA GATCATCGAC CAAGGGGTGG ATGGTGCCCA GCGCGCCGTG
GCTCAGACAG AGTCGGCCCT GAGTTCACTC AACACCATAG TGAATCAAAT TCAGGAGGTC
TCCAGCCAGG TGACCCATAT CGCGACCGCC GCCGAGGAGC AGAGTGCCGT GACCGAAGAG
GTCAGCCGTA ATATCACAGG CATCTCAGAT TCCGCCTCCG AGCTGGCGAG ACTCGCCGAC
GAGGCCCAGC AGAGCAGTGC CAGCCTGGCG GGCCTGGTGG AGCAGCAACA CCAGCAGTTG
GGTAAGTTAA AGACCTAA
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| Protein sequence | MKHLSISTKL LWITSALFLI IVAILSFSLW WSLSDKNAQL AGQVQGALHD ETRQRLSARA
GEYGERVAGF INEAYRIPFS FAGMIEQSAA SQPLSREGVE ESVAGVLRKN SQLSSMYAQF
EPNGYDGRDG DYTQKISHSV PEVGTLEIYY TRSDDGSVEH QQVDDASEKY DATLKEFGVR
EAEWYLCAKD TKQPCLMEPY LYEISPGNTA LMTSLTVPVV VGGSFRGVIG VDVNLPVFQK
LIDELSASLY QGKAKVTLLS QKGLVVAASH YDKKARPLGE SIAPSLASQL TGLHRQGGYL
EQGDNIIVAY PIEIPLAKAQ WSLVIEVAKA DAYQAANAMD KAMSAMASSL GSLLLIVGVI
VSLIAVVTIS LVIRSIVAPL KVIQSRVENL ASAEGDLTQQ VTVESHAELI ALGGGINGFI
NKLRLLIGEL KELASRSQAE SQVAAEIAQQ THNSVNRQYS DIESVVTAVN EMSATALEVA
KASEQTASET EAMTLNVKAG EDSLSQAMGY VTHMSQESLL AKEAVGKVAE SSTNISKILE
VISAIAEQTN LLALNAAIEA ARAGEQGRGF AVVADEVRAL ASKTQSSTDE IGKLIEALQR
EVNSASQIID QGVDGAQRAV AQTESALSSL NTIVNQIQEV SSQVTHIATA AEEQSAVTEE
VSRNITGISD SASELARLAD EAQQSSASLA GLVEQQHQQL GKLKT
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