| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2295 |
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| Symbol | |
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| ID | 4922288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2684469 |
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| End bp | 2685344 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640163880 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001094420 |
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| Protein GI | 127513223 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGAAT GGGTCGAGAA AATTTCGTTT AGTGAAGCCA GTCCGTTAAC GGCGCAGGCG
CAGGACAATA AGTTTGGCTT TCATCGCAAG CGGCCAGAGG TGATGGCCCA CAGCCATTGG
CATGGACACA TAGAGATTAA CTACCTCTTT GATTGTTCAG CGGATTATTT GATTAACGGT
CAGGAGATCT CTGTGCCCGA GGGACGGATG ATCATCTTCT GGGCTTCGAT CCCCCATCAG
ATGACCGCCT GTCATGGTGA CGGTGAGATA GTCAATATCT ACATTCCGCT GCAGGCCTTC
CTCACCTGGA TGCTGCCGGG GGAGTTTGTC AGCCAACTGC TCCACGGCGA GGTGATGGTG
TCGGACAGCC TCTATGTGTG CGATCGCCAG CTGACGCAGA TCTGGGAGGC GGATATCGCC
AGCCAGGAGC CTCTGCTCGC CAGCCAGGTG ATCAACGAGA TCCGCAACCG TATCCGCCGC
ATGGCGATAG AGCATTACAG CACCTTTAAT CTGGCCCATC GTAGCGGCCA TGGGGTCGAC
AAGCCGGTGT TTGGTGGGCT TAACCATATC CAGACCATGC TGCGTTATAT CGCCGACCAT
TATGATCAGA AGATCACCAT AGAAAACGTG GCCATGTCCA CCGGGCTGCA CAAGAACTAT
GCGATGAAGC TCTTCAATCG CGTAATGAAA GTCTCAATAA AACAATATAT TAACCAGCTA
CGGTTGCAAC ATGCCCAGGC CTTGCTGATC GATACCGAGA ATCCTGTGCT GAACATAGCA
CTGGAGGCGG GATTTGGCTC GGTGAGCCGC TTCTATGACA TCTTTCAGCG TGAGTTCAAC
ATGTCGCCGC TGGAGTTTCG TCGCCGGGTG GGATGA
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| Protein sequence | MFEWVEKISF SEASPLTAQA QDNKFGFHRK RPEVMAHSHW HGHIEINYLF DCSADYLING
QEISVPEGRM IIFWASIPHQ MTACHGDGEI VNIYIPLQAF LTWMLPGEFV SQLLHGEVMV
SDSLYVCDRQ LTQIWEADIA SQEPLLASQV INEIRNRIRR MAIEHYSTFN LAHRSGHGVD
KPVFGGLNHI QTMLRYIADH YDQKITIENV AMSTGLHKNY AMKLFNRVMK VSIKQYINQL
RLQHAQALLI DTENPVLNIA LEAGFGSVSR FYDIFQREFN MSPLEFRRRV G
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