| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2262 |
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| Symbol | |
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| ID | 4922815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2641030 |
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| End bp | 2641839 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640163847 |
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| Product | exonuclease III |
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| Protein accession | YP_001094387 |
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| Protein GI | 127513190 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0708] Exonuclease III |
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| TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000598983 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0890605 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGAAAATAG TTTCATTTAA CATCAATGGT CTCAGAGCCA GACTGCACCA GCTACAGGCG
CTGATCGACA GCCATAGCCC GGATATCATC GGCCTGCAGG AGACCAAGGT TCACGACGAG
GCCTTCCCCC TTGCCGAGGT CGAGGCCATG GGCTATCAGG TGCACTACCA TGGTGGCAAG
GCTCACTATG GCGTCGCCAT GCTCTCCAAA CTGCCACCGG TCAAGGTACA GAAGGGGTTC
CCCACAGATG ATGACGAGGC CCAGCGCCGA ATGATCATGG GCACCTTTAC CCAAGCCAAC
GGCCGTCAAC TGACGGTGCT CAACGGTTAC TTCCCCCAGG GCGAGAACAT CAGTCATGAA
ACCAAGTACC CGGCCAAGCG CAAGTTCTAC CAAGATCTGA TGCACTATCT GCAGCAGCAC
CATAGCCCAG ATGAAGATAT CGCCATCATA GGCGACATCA ACATCTCGCC AATCGATTTG
GATATCGGCA TAGGTGAAGT CAACGCCAAG CGTTGGTTGA AGACGGGTAA ATGCAGCTTC
CAGCCCGAAG AACGTGAGTG GCTACAGACG CTGCTGGATT GGGGATTAGT CGACACCTTC
CGTCAGCTGC ATCCAACACG CAGTGAGCGC TACTCCTGGT TCGACTATCG CAGCAAGGGT
TTCGATGATA ACCGCGGCCT GCGCATCGAC GTGATCCTGG CAACGCCGTC ACTGGCTGAA
CGTCTGACCG AATCTGACGT AGATTATGAT CTGCGCGGTA TCGACAAGCC TTCCGATCAT
GCACCCATCT GGAGCTGCTT CAAAGATTAG
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| Protein sequence | MKIVSFNING LRARLHQLQA LIDSHSPDII GLQETKVHDE AFPLAEVEAM GYQVHYHGGK
AHYGVAMLSK LPPVKVQKGF PTDDDEAQRR MIMGTFTQAN GRQLTVLNGY FPQGENISHE
TKYPAKRKFY QDLMHYLQQH HSPDEDIAII GDINISPIDL DIGIGEVNAK RWLKTGKCSF
QPEEREWLQT LLDWGLVDTF RQLHPTRSER YSWFDYRSKG FDDNRGLRID VILATPSLAE
RLTESDVDYD LRGIDKPSDH APIWSCFKD
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