| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2242 |
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| Symbol | |
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| ID | 4922878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2619538 |
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| End bp | 2620467 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640163827 |
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| Product | dihydrouridine synthase, DuS |
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| Protein accession | YP_001094367 |
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| Protein GI | 127513170 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000197491 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000869385 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGTGTCA TCTTAGCCCC GATGGAAGGC GTTGCCGACG CCCCGATGCG AGCCCTGCTA
ACCAGCGTTG GTGGCTATGA CATGGTGATC AGCGAATTTA TTCGTGTCGT CGATCAATTA
CTGCCGGAAA AAGTCTTCTA CCGACTCTGC GCCGAGCTTA AGTACCAATG CAGAACCGCC
TCGGGCACTC CGGTGCGCCT GCAATTGCTG GGGCAGGAGC CTAACTGGAT GGCCGAGAAT
GCCATTCGCG CCGTCGAGCT CGGTTCTCGC GGCGTCGACC TTAACTATGG CTGCCCTGCC
CCTATGGTTA ATCGCAGCAA GGGCGGCGCG GCGCTGTTAA AAGAGCCCGA AACCATCTAC
CGGGTAACCC AGGCCGTGAG GCAGGCGGTG CCCAAGGACA AGCCAGTGTC GGCCAAGATC
CGCCTGGGGT GGGATGACAA GAGCCGCTGC ACAGAAATCG CCCAGGCTAT CGAGGCGGCC
GGCGCCACCG AACTGACGGT GCACGCCCGC ACCAAAGAGG AAGCCTACCG ACCGCCGGCG
CACTGGGAAT ATATCGCGCA GATAAAATCT GTCACTCGCC TGCCCATCAT CGCCAACGGC
GAGATCTGGG GCAGAGAAGA TTACCTCAAA TGCCGCGAGG CCAGCGGCTG TGATGATGTC
ATGCTCGGCC GCGGTGCCCT GACCATCCCC AACCTGGCCC ACGTAGTAAA AGGCGAGCAG
ACGCCCATGC CCTGGCCCGA GGTGCTGGCG CTGCTGCTGC AATATTCAGA ATTTGAGATA
GTCAGCGAGA AAGAGAAGTA CTATCCGGCG CGCATCAAAC AGTGGCTGAG GTTTATCGCC
CGCCACTATG AGGAGGGCGA AGCCCTGTTC CGCCAGGTAC GCGTACTGAA AGATACCCAG
AGCATCTTGT CCCTGCTACG CAGTTGCTAG
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| Protein sequence | MRVILAPMEG VADAPMRALL TSVGGYDMVI SEFIRVVDQL LPEKVFYRLC AELKYQCRTA
SGTPVRLQLL GQEPNWMAEN AIRAVELGSR GVDLNYGCPA PMVNRSKGGA ALLKEPETIY
RVTQAVRQAV PKDKPVSAKI RLGWDDKSRC TEIAQAIEAA GATELTVHAR TKEEAYRPPA
HWEYIAQIKS VTRLPIIANG EIWGREDYLK CREASGCDDV MLGRGALTIP NLAHVVKGEQ
TPMPWPEVLA LLLQYSEFEI VSEKEKYYPA RIKQWLRFIA RHYEEGEALF RQVRVLKDTQ
SILSLLRSC
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