Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_2240 |
Symbol | |
ID | 4922876 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 2617717 |
End bp | 2618553 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640163825 |
Product | hypothetical protein |
Protein accession | YP_001094365 |
Protein GI | 127513168 |
COG category | [S] Function unknown |
COG ID | [COG3220] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000381376 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000876549 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATGACAC AAGCTAAGGT GGGGCTCGGC CTGCGCCGCG AGATGCTAGA TGAGTTTTGC CAGTCTGTCC CCGGTGCCAT CGATTTTTTC GAGGTGGCGC CCGAGAACTG GATGACACTT GGTGGTAAGT TTGGCCGTCA ATTTAGGCAG TTAACCGAGA AGCACAAGTT TTTCTGCCAC GGACTGTCGC TCTCTATCGG TGGCCCAGAG CCCCTAGATA CGCGTTTCGT TAAGCAGATT AAAACCTTTC TAGACCATCA CGACATAGAG ATCTATTCGG AGCACTTAAG TTACTGTTCG GGCAAGGGCC ATCTGTATGA CTTGATGCCA ATCCCCTTTA CTGATGAGGC GGTGCGCCAC GTGGCAAGGC GTATTGAGCA GGTACAGGAT ATCTTAGAGC GTCCCTTTAT TCTGGAAAAC GTATCCTTTT ACGCCTCGCC CGCGAGCGAG ATGAGCGAGT GTGAGTTTGT CAGCGCCGTG CTTGAAGAGG CAGATTGTCG CCTGCTGCTG GATGTGAACA ACATCTATGT TAACTCGATC AATCATCAAT ATGACGCCGA AGCCTTCTTA AGGGCCATGC CCAGCGAGCG TATCGCCTAC CTGCATATTG CCGGTCATTA CGATGAGGCG GAAGATCTTA AGGTCGATAC CCATGGCAGC GAGGTGATCG ACCCCGTCTG GCGTTTGTTA GCGATCTGTT ATCAGACCCA TGGTGTGTTT CCAACCTTGC TCGAGCGTGA CTTTAATATT CCTGCCACCC ATGAGTTGCT CAAAGAGATC AACAAGATAC ATGGCTATCA GACCAAGGCA TTACAGCCCA GCCATCGGAG CGCCTAG
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Protein sequence | MMTQAKVGLG LRREMLDEFC QSVPGAIDFF EVAPENWMTL GGKFGRQFRQ LTEKHKFFCH GLSLSIGGPE PLDTRFVKQI KTFLDHHDIE IYSEHLSYCS GKGHLYDLMP IPFTDEAVRH VARRIEQVQD ILERPFILEN VSFYASPASE MSECEFVSAV LEEADCRLLL DVNNIYVNSI NHQYDAEAFL RAMPSERIAY LHIAGHYDEA EDLKVDTHGS EVIDPVWRLL AICYQTHGVF PTLLERDFNI PATHELLKEI NKIHGYQTKA LQPSHRSA
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