Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_2200 |
Symbol | |
ID | 4923114 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 2560961 |
End bp | 2562031 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640163785 |
Product | imidazole glycerol-phosphate dehydratase/histidinol phosphatase |
Protein accession | YP_001094325 |
Protein GI | 127513128 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0131] Imidazoleglycerol-phosphate dehydratase [COG0241] Histidinol phosphatase and related phosphatases |
TIGRFAM ID | [TIGR01261] histidinol-phosphatase [TIGR01656] histidinol-phosphate phosphatase family domain [TIGR01662] HAD-superfamily hydrolase, subfamily IIIA |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0671818 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAAAC AGAAAATCCT CTTTATCGAC CGCGATGGCA CACTGATCGA GGAGCCAGTC ACCGACAAGC AGGTCGATAG CCTGGCCAAG CTGGTATTTG AGCCTCAGGT GATCCCCGCA CTGCTCAAGC TACAGGGCGC CGGCTACCGC CTGGTGATGG TGAGCAATCA GGACGGCCTT GGCACCCCCT CCTTCCCCAA GGATGACTTC GATGCGCCCC AGAATATGAT GATGCAGATC TTCAACAGCC AGGGGGTCAA GTTCGATGAT GTGCTCATCT GCCCACACTT TGACGATGAA AACTGTAGCT GCCGCAAACC TAAGCTGGGT CTGGTCAAGG CTTACCTCAC CGAGGGCCGG GTCGACTTTA CTCAGTCGGC GGTGATCGGC GACAGAGAAA CCGATCTGGG CCTGGCCGAG GCGATGGGCA TCACAGGCAT ACAGTACAAT CGCGACACCT TGAACTGGGA CGCCATTGCC GAACAACTGC TTGGGGGCAA CCGCGTGGCG ACTGTGGTGC GTACCACCAA GGAGACCGAC ATCAAGGTCA CTGTCGATCT CGACAGTCAG CTAAAGAGCA GCATCAATAC CGGCATCGGC TTCTTCGACC ACATGCTGGA TCAAATCGCC ACCCACGGTA ACTTCAGGCT AGATGTGAGC GTCGATGGCG ATCTGGAAAT CGACGATCAC CACAGCGTCG AAGACACGGC CCTGGCCATT GGTGATGCCC TCAGGCAGGC CCTTGGGGAT AAACGCGGCA TCGCCCGCTT CGGCTTTAGC ATCCCCATGG ATGAAGCCAG CGCCAGCTGC CTGCTGGATC TCTCCGGTCG CCCCTTCATC AAGTTTGAGG GGCAGTTCGA GCGCGAGATG GTCGGCGAGA TGGCCACTGA GATGGTGCCT CACTTCTTCC GCTCCCTCGC CGATGGCCTG CGCTGCACCC TGCACCTCTC GACCCAAGGC GATAACGATC ACCACAAGGT GGAGAGCCTG TTTAAGGTCT TTGGCCGTAC CCTGCGCCAG GCGGTGAAGG TCGAGGGCGA CGCCCTGCCA TCGAGCAAGG GGGTGCTATG A
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Protein sequence | MMKQKILFID RDGTLIEEPV TDKQVDSLAK LVFEPQVIPA LLKLQGAGYR LVMVSNQDGL GTPSFPKDDF DAPQNMMMQI FNSQGVKFDD VLICPHFDDE NCSCRKPKLG LVKAYLTEGR VDFTQSAVIG DRETDLGLAE AMGITGIQYN RDTLNWDAIA EQLLGGNRVA TVVRTTKETD IKVTVDLDSQ LKSSINTGIG FFDHMLDQIA THGNFRLDVS VDGDLEIDDH HSVEDTALAI GDALRQALGD KRGIARFGFS IPMDEASASC LLDLSGRPFI KFEGQFEREM VGEMATEMVP HFFRSLADGL RCTLHLSTQG DNDHHKVESL FKVFGRTLRQ AVKVEGDALP SSKGVL
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