Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_2198 |
Symbol | hisD |
ID | 4923112 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 2558481 |
End bp | 2559812 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640163783 |
Product | histidinol dehydrogenase |
Protein accession | YP_001094323 |
Protein GI | 127513126 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0141] Histidinol dehydrogenase |
TIGRFAM ID | [TIGR00069] histidinol dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0308106 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACAA ACACCATGAC ATCCACACAG ATGCAGCGCC TCGACTGGCA GGCGCTCAAT GACCAGGCAA GACGCGAGGC CCTGTCACGC TCGCCCCTGA TTGGCGACGC CAACCTTGAG CAGCAGGTCA AGGCGATCAT CGACCAGGTG GCCAGCCAGG GCGACGTGGC GCTAAAAGCC TTCTCACAAA AATTCGATAA GGTAGAACTC GACGCCCTGC GCCTTAGCGA TGCGGCGATA GCAGCCGCCA GCGAGCGAGT GACGCCCGAG ATCAAGGCAG CTATCGAGCA GGCCAAACAG AACATCGAGA CCTTTCACCA GGCCCAGGCC TTCAAGGGGA TCGACCTTGA GACCCAAGCC GGGGTGCGCT GCGAGCTGCG AAGCGAGCCA ATCGAAAAGG TGGGCCTCTA TATTCCCGGT GGCAGTGCGC CGCTCATCTC TACCGTGCTC ATGCTGGCAC TGCCGGCCAA GATAGCCGGT TGTGAGCAGC GGGTGTTGGT CAGCCCACCA CCGATCGACG ATGCTATCGT CTACGCTGCT AAGGCCTGTG GCATCACAGA TATCTATCAG ATAGGCGGCG CCCAGGCGAT CGCCGCCTTA GCGCAGGGGA CAGAATCTGT GCCTGCGGTC GATAAGATCT TCGGCCCGGG CAACCGCTAT GTTACCGAGG CCAAGCGCTT AGTTGCCCAG GACAGCCGCT GCGTGGTGAG CATAGACATG CCCGCCGGCC CCTCAGAGGT GCTTGTGATC GCCGATAACG AGGCGAATCC CGACTTCATC GCCGCCGATC TCCTCTCTCA AGCCGAGCAC GGCCCCGACT CTCAGGTGAT GCTGGTCACC GACAGCCAAA CCTTGGCAGA CGCGGTCAAC CAGAGCCTTG GCGAGCAACT GGCAAGACTG CCCAGGGCCG AGATCGCCAT GCAGGCCCTG AGCGCCAGTC GCACCTTGAT TGTCGAGGAT ATGGCCCAGG CCGCCGAGGT TTCTAACCGC TATGGCCCTG AGCACCTGAT CATTCAGACC CGCGCCCCCC GTAAACTGCT GAGTAAAATC CGCGCCGCCG GTTCGGTATT TCTTGGCGCC TACACACCAG AGTCCGTTGG CGATTACGCC AGCGGCACCA ATCACGTGTT GCCAACCTAT GGCTATAGCC GCGCCGTCTC CAGCCTGTCG CTGGCCGACT TTAGCCGCCG CTTCACCGTG CAGGAGCTGA GCGCCGAGGG CTTGCGCGGC CTAGGCGAGT GCGTGATGAC CCTGGCCAGC GCCGAGCAGC TCGATGCCCA CAGAAATGCC GTCGCCGTGC GCCTTGCCAC GCTAACGGGC GAGGAGAAAT AA
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Protein sequence | MTTNTMTSTQ MQRLDWQALN DQARREALSR SPLIGDANLE QQVKAIIDQV ASQGDVALKA FSQKFDKVEL DALRLSDAAI AAASERVTPE IKAAIEQAKQ NIETFHQAQA FKGIDLETQA GVRCELRSEP IEKVGLYIPG GSAPLISTVL MLALPAKIAG CEQRVLVSPP PIDDAIVYAA KACGITDIYQ IGGAQAIAAL AQGTESVPAV DKIFGPGNRY VTEAKRLVAQ DSRCVVSIDM PAGPSEVLVI ADNEANPDFI AADLLSQAEH GPDSQVMLVT DSQTLADAVN QSLGEQLARL PRAEIAMQAL SASRTLIVED MAQAAEVSNR YGPEHLIIQT RAPRKLLSKI RAAGSVFLGA YTPESVGDYA SGTNHVLPTY GYSRAVSSLS LADFSRRFTV QELSAEGLRG LGECVMTLAS AEQLDAHRNA VAVRLATLTG EEK
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