| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2169 |
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| Symbol | |
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| ID | 4923344 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2522015 |
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| End bp | 2522944 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640163754 |
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| Product | hypothetical protein |
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| Protein accession | YP_001094294 |
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| Protein GI | 127513097 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.199565 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAGCT ATCAGAGACT TTTAGTGGTT GTAGATGAAC ACGATTTCAG TTTAAAGGCC
GTTTCCCGCG CCGTGTATTT GGCCAGTAAA ACCCACGCGG CAATCATAGT GATGATGTTA
GAGCACAGCC ATTTCGTCAA TCGTCTAGTG GACACCTTTG AGGCCGATGG CAACGAGGGG
CAGACCCAAC CCCTGACCAA GGAGCGTAAG CTGAGCTGCC TAAACGCCTT TATCAGTCAG
GCCGCCCAAT CGGGGCTCTC TATCTCCAAG GCGTCTATCG CCTGTCATAG CAGCGACGAT
GTGCTGCAGT TTTGCGACGA CTTCAAGGTG GATGCGGTGA TCTTAGCCGC CTCGCGCCAT
AAGCTATGGA ACTGGCTGAC CATCAAACCG CTGGATGTGC GGCTGATCCG CGAGTCTTCC
CGCCCCGTGG TGGTGGTTAA GGATCATCTG TGGCAACCCG GCGGGCACAT TCTCTCTCTG
GTTGAGCCCT GCGCCGATGA TGTGACCCAC AGGGCGCTCA ATGACGCGGT GCTGCAGACT
TCGGAGCATT TCTCTCAGCT GCTGGCGGGG GATTGTCATC TTATCGATTG CTACTATGGC
GAGACGCCAA GCATCTCCTT CCATCAGGCG CTGGCCCCTG CCAATGATGA GAACTACCAC
CTGCAGAAGA TGTCTAGTTA TTCCAGCCGC TATCACCTGC AGCCAAAGGG GGCGGCGGTG
AGTAATCATC ACCTTCATCT GGCCAAGTCA CTGCCGGAAG ATGCTATCGA GTCCTTAGCC
AAGGAGGTGG ATTCTGAGCT GGTGATCGTC GGCGATACCG GCAATGGCAG CATGTTTTCT
AACATGTGCG GCCATGTGGG CGAGCAGGTG ATCGACAGGA TCCAGTGCGA TCTCTTGGTG
GTCAAGCCTC AAAGCGCTCA TGCCATCTAG
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| Protein sequence | MDSYQRLLVV VDEHDFSLKA VSRAVYLASK THAAIIVMML EHSHFVNRLV DTFEADGNEG
QTQPLTKERK LSCLNAFISQ AAQSGLSISK ASIACHSSDD VLQFCDDFKV DAVILAASRH
KLWNWLTIKP LDVRLIRESS RPVVVVKDHL WQPGGHILSL VEPCADDVTH RALNDAVLQT
SEHFSQLLAG DCHLIDCYYG ETPSISFHQA LAPANDENYH LQKMSSYSSR YHLQPKGAAV
SNHHLHLAKS LPEDAIESLA KEVDSELVIV GDTGNGSMFS NMCGHVGEQV IDRIQCDLLV
VKPQSAHAI
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