| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2166 |
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| Symbol | |
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| ID | 4923341 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2517223 |
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| End bp | 2521146 |
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| Gene Length | 3924 bp |
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| Protein Length | 1307 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640163751 |
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| Product | hypothetical protein |
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| Protein accession | YP_001094291 |
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| Protein GI | 127513094 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.678719 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCGAC GCTTTTTTAC CTCCCGCAGC ATAAAATGGA TAGCCGGCGC CATGGCGATG
TCCCTACTGC TGTTGCTGCT GCTCCTCGTG CTAGTGGCGA GTCAATTGGA ATACCTGGTT
AAACGTCTCG CCAATCCCTA TCTGGCTAAT GCTGGCATTA GCATAGAAAG TCTGCGCTTA
AGCTCCAGCG ATCTGATGGC GCTCAAGCTG CCCATGGCGA AGCTTAAGGT CGATGGCAAC
CTGGTCAGAC TCGACGATCT TGAGCTTACA CTCGCCGAAG ACTGGTTATC GGCGCCAATG
GGTCTCACCC AGATAGATTC GCTTTCGGTG CGCCGCGCCG AGGTGTCACT GAGCCAGGAC
TATTTCGATA ATCTAGGTCG TGAGCAAGCA TCAGGCGCCA GCAGCGCCCT CAACCTGGGC
GCCCTGCCGC AGATCGCCTT GGGCGAAGTC AGTTTCAACC TGTTAGGCAA ACAAGCTAGC
TCCTTAAAGA CGCAACCCTT GGGCCTCAAG CTGGATTATC TTAACCTGGA TAATCAAGGT
CAGCTTACCG GCGCCCTCAG CTTCTATCAG GCGCCTCTGC TGAGCCTTGC GGCGACACTC
GAGAAGACCC GCTGGCAAAT CGATAGCCGC CTCGAATTCG AGCCCCTTGG CCGCCTCATT
GGCGAGCTCA GCATGCTCAC CTCAGCTGGC CAAAGTGAAC CAAAGCCAGA CACGTCTCCT
GCGCACCAGG CATCTAATGT TTCAGAGGCG TCTGGCGTTT CAGAGGCGCC TAGCCTTTCA
AAGGCACCTG CATTAGTCAC GGCCCTGCAA GATGTTAACC AGCGTTTAAC CGAAATCTTT
ACCCTAAGTG GCAGCCTCAG CTCCCGCGGC GAATTAGACC TTATCAAGGG CGTACTGCAT
TCTAGCCATG AATTTGATTG GCTCAAGATT CAGCTAAAAC GGCTAGGTGG CCAGACGCTA
TCGCCAGAGC TAAGCATTAC CGTGACGGGC CAGGCGCAAG CTAAACAAGA AAGCGCTTAT
CTCACTCAAT CAAGTCATGC TCAGTCAAGT TATTCTAGAT CCATCCAGGC TCAGTCCAGT
CAGAGCATGA TACTTGGACT CAATGGCCCC CTAAATGATC TGCATCTCAC GCTGTCGCCA
ACTTTGGTCA CCAGCAGCAC AACGCTGGAG CAGCTTGGAG AACTGGCAGG TGAATCAGAG
TCCATCGCCG CCCTGCTCAC GGCACTTAAG GCCCAATCTC TAGATGAGCA AGCACATGAT
AAGCAGGTAC ATGATAAGCA GGCGCCAGAT ATGCGAGCTC CAAACCAGCG CTCAGCCGAT
GAACATACGA CCAAGCTCTC TCTGGTGCTT GGCCAAGAGA TGAATGGTGA AGATGCGCTC
GATTTTTCGC TCCAAGATGG AGACTTGCAG CTAGGAGCTC TCACCGCCAA GGTTGAAACT
CAGGGATTAG TGCTCGCCGC TAAGCTTAAA AAAGCCAGGC TCGAAAAGGC TAGGCTAGAA
GAAACCAGGT TAGAAAAAGA TCCTGAATCG AAGCCGACTT CGGCCTGGCA GCTCACCGGC
AACTGGCAAC TTGATGCAGC GCTTAAACAG CCGCTGTGCC TAACCCTGCC GCCCTATCCA
CAGACAGGCA CCGGCTGTCA GGATCGGCCT AAGAATAAAA CAGACATAGA CAACCGCCTC
ACGCTTGCAA AAGCCAATCT ACAGCTAGAA GGCGAGCTAG ATGCCAAACA AGCAGATGCG
ACAGATGATT CGACAAATGA TTCGCAAAAA AATAGCACTC TCAATCTAAC CCTGGCGGGC
GAGCTGAACC TAGCGCAACC CGAATTTAAT CATAGAGACC TTAAGGTGGG CGCTAGCCAA
ATCACCACAG AAATTCCGGC GCCACTCAAT CTCAGCCTCG AAAAGGGGCC AGAACTTAAG
CTAAACCTTG ACTGGCAAGG GCTAAAAGTC GCGATCAATG GGCATCATCT AAGCTGGCCG
GCGATTCAGG AGATGGCTAA CAAAGAGCCA AAAGCACAGC TAACCAGCGA GCAGACTCGC
ACGAGTTTTG GCGCAGGTCA TTTTACCTTT AGCCCAGGCA GGCCGCTTCT GGTCGAGTTA
GCTAGCTTTA TGAGTGTCAC TCACTCCCCT CGTCTGACGC TGCCACAGGC TTCAATGGCT
GAGATCTCCA TAACAGACGC CTCCAGAACA GAGAGAGCAG CAAAGCCGCT GGAGCGTGAA
CTTACCGCCA GTGAATTTGT ACTCGAAGCC GCAGAGCCAC TGCGCCTCGA TGCGCAAGCA
CTGGTGCTCC CGCCCGTCGG GTTAAAGGTT ATTGCGCTGG CCGCCAGCGA GCAAAAAGCC
GTTCAGGGAA AGGGCCAAGA ACAGGCTCAA GCCCAGGTTA AAACCACTCA AGTTAAAACA
ACTCAAGTTA AAACCACTCG GGTCAACCTG GATGAGTTAA GCCTTGCCAC CCAGAGCATA
GCGCTAACGC CAAAAGCCAC CAAGACTGAC ACAATTACAG GAACAGAAAG CGCCGCGGCG
AAGCTATCTC AGTCAACACT ATCACAGTCG ACGCTGTCAC TGTCGCCAGA TGCACTGTTA
GCCTTCCCCT GGCAGAGTGA GGCGAACTAC CAACTGACCA ATCTTAAGGT GAGCGAGGAG
AGTGTTCGCC TCAATAAATT ACGCCGCAAG ACGCTAATTA AACTCCCCAG CGCCAGCCTG
AGTCAGTCGC TGCATTGGCA AGGTGCCCTG CAAACTTCTG GCAGCTCAGG CACTAAGTCC
TATTCAGGGC CTGTATCTGA GCCATCAAAA ATTTTGATCC AATTAGCCGG CGATTCGAAT
GGGCACTACG GGCTGACAAC CAAAGAAAAG TGGAACCTGG ATGGCCTGCC ATTTTACAGC
GAGCATCATC TTGGGCTGAC TCAATCGCTT AAGCCCAGGC TGCTTACCGG AGAACTCACG
CTAGAAAGTG ATGCCAACGA GCTGATGAAG CGATTGATGC GTATGCAGGG AGCAAGCCTG
GAAAATCCCT TAATCGGCGA TATCAATCTC ACCAGCCAGC ATAGCCTCAA CTGGCTGGGC
GATAAGATGG ACTTTGCCTT TGCCTTAATA CCAGAGGTCA AGCTCAGTGA GGGTAGCTAT
AACGCCCTGC CGTTCGAGCA GGCCGAGTTT ACTGGTCAAT GCCAGTTAGA TGGTGTCAAA
GCGCCTAACT CTCAAACGGC AAAGCTTGCC TGTGAGCCGC TGTCACTCAA GGTCGCCGCC
TTCAATCCAG GGGTGCTGAT CACCGACATA AACGCCCACG CTAAGCTCGA GCTAGATCTG
ACCCAAGGCG AAACGGAAGC TGCAACCGGA GCTCAAACAG GTGCTCAAAC AGGTGCTGAA
TTGGCTCTCA GCGGCGCCGA TGTGAAGCTT GATGCCAGGG CCAACACCTT GGGAGGCGAG
ATCTTACTGC CTATCTTTAA CCTGAACCTC GGCGCCCCCT CCTCCGCCTA TCTGGTGCTG
CAGGGGCTAG ATCTCGAGCA GCTGCTCGCC GCCCAGCCCC AAACCGGCAT CTATGCCGAT
GGCATCTTCG ATGGCGTGCT GCCGGTGCAG CTCGAACATG GTCAGGTGAG CATCACCAAT
GGGCAGCTCG CGGCGCGGGC CCCCGGTGGC CTCATCAAGG TGGATGACAA TCCGGCGGTG
CTGCAGATGC GCCTGTCGCA ACCCTATCTC GATTTCGCCT TCTCGGCGCT GGAGGAGCTG
CACTACACCC AGCTATCGAG CAGTTTCGAC ATGGCCCCCA ACGGCGATGC CCTGTTAAAA
GTTCAGGTGA AGGGACGGGC CAAAGATATT GAACGTCCTA TCCATTTAAA CTACGCTCAG
GAAGAAAATA TGTTGCAGCT ACTCAAGAGT TTACAAATCG GTGATAGACT GCAAAGCGAA
ATCGAGCGGG CCATGGCCAA CTAA
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| Protein sequence | MSRRFFTSRS IKWIAGAMAM SLLLLLLLLV LVASQLEYLV KRLANPYLAN AGISIESLRL
SSSDLMALKL PMAKLKVDGN LVRLDDLELT LAEDWLSAPM GLTQIDSLSV RRAEVSLSQD
YFDNLGREQA SGASSALNLG ALPQIALGEV SFNLLGKQAS SLKTQPLGLK LDYLNLDNQG
QLTGALSFYQ APLLSLAATL EKTRWQIDSR LEFEPLGRLI GELSMLTSAG QSEPKPDTSP
AHQASNVSEA SGVSEAPSLS KAPALVTALQ DVNQRLTEIF TLSGSLSSRG ELDLIKGVLH
SSHEFDWLKI QLKRLGGQTL SPELSITVTG QAQAKQESAY LTQSSHAQSS YSRSIQAQSS
QSMILGLNGP LNDLHLTLSP TLVTSSTTLE QLGELAGESE SIAALLTALK AQSLDEQAHD
KQVHDKQAPD MRAPNQRSAD EHTTKLSLVL GQEMNGEDAL DFSLQDGDLQ LGALTAKVET
QGLVLAAKLK KARLEKARLE ETRLEKDPES KPTSAWQLTG NWQLDAALKQ PLCLTLPPYP
QTGTGCQDRP KNKTDIDNRL TLAKANLQLE GELDAKQADA TDDSTNDSQK NSTLNLTLAG
ELNLAQPEFN HRDLKVGASQ ITTEIPAPLN LSLEKGPELK LNLDWQGLKV AINGHHLSWP
AIQEMANKEP KAQLTSEQTR TSFGAGHFTF SPGRPLLVEL ASFMSVTHSP RLTLPQASMA
EISITDASRT ERAAKPLERE LTASEFVLEA AEPLRLDAQA LVLPPVGLKV IALAASEQKA
VQGKGQEQAQ AQVKTTQVKT TQVKTTRVNL DELSLATQSI ALTPKATKTD TITGTESAAA
KLSQSTLSQS TLSLSPDALL AFPWQSEANY QLTNLKVSEE SVRLNKLRRK TLIKLPSASL
SQSLHWQGAL QTSGSSGTKS YSGPVSEPSK ILIQLAGDSN GHYGLTTKEK WNLDGLPFYS
EHHLGLTQSL KPRLLTGELT LESDANELMK RLMRMQGASL ENPLIGDINL TSQHSLNWLG
DKMDFAFALI PEVKLSEGSY NALPFEQAEF TGQCQLDGVK APNSQTAKLA CEPLSLKVAA
FNPGVLITDI NAHAKLELDL TQGETEAATG AQTGAQTGAE LALSGADVKL DARANTLGGE
ILLPIFNLNL GAPSSAYLVL QGLDLEQLLA AQPQTGIYAD GIFDGVLPVQ LEHGQVSITN
GQLAARAPGG LIKVDDNPAV LQMRLSQPYL DFAFSALEEL HYTQLSSSFD MAPNGDALLK
VQVKGRAKDI ERPIHLNYAQ EENMLQLLKS LQIGDRLQSE IERAMAN
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