| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2158 |
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| Symbol | |
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| ID | 4923330 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2503215 |
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| End bp | 2504945 |
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| Gene Length | 1731 bp |
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| Protein Length | 576 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640163743 |
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| Product | gamma-glutamyltransferase |
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| Protein accession | YP_001094283 |
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| Protein GI | 127513086 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0405] Gamma-glutamyltransferase |
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| TIGRFAM ID | [TIGR00066] gamma-glutamyltranspeptidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.148613 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGTCCAA TAAAAACCTT ACTCTTTGCC ATCAGCCTCA GCCTGCCGCT CGTCGCAGGT
CAGTTTGCCC AGGCCACCGA ATCCTCCATC TATAGCCACA GCGCCACTGT GCAGCCCATC
TGGGCCAAGC ACGGCATGGT GGCCAGCCAG GAGGCCGTAG CCACTCAAGT CGGGGTCGAT
ATTCTCAAGC AAGGCGGTAA CGCGGTCGAT GCGGCGGTCG GCGTCGGCTT TGCCCTGGCG
GTCACCCTGC CAAGGGCCGG CAACATAGGC GGTGGCGGTT TCATGCTGGT GCATCTGGCC
GAGGGCAACA AGACGGTCGC CATCGATTAT CGCGAGGTTG CCCCCAAACG CGCCCACAAG
GACATCTTCC TTAATGAGCA GGGTGATGCG GTCGCCAAGC TCAGCCGCGA ACATGGCCTG
GCTGTAGGCG TACCCGGCAC CGTCATGGGG ATGGAACTGG CCCTTAAGAA ATATGGCACC
ATGACCATGG CCCAGGTGAT CGAGCCCGCC ATCAAGCTTG CCGAGCAAGG CATCACAGTC
ACCCCGGATC TCGCCACCTC CCTTGCCGGG CTTAAACGCC GCATCTCTCA GTGGCCAAGC
TCCAAGGCGA TCTTCTATCG CCCAGATGGC AGCAACTTCG AGATAGGTGA CACCCTCAGC
CAAAAGGCGC TGGCCCACTC ACTCAAGCTG ATCAAGGCCC AAGGCAGCAA GGGATTCTAT
GAGGGCGAAA CCGCCGAGAA GATAGTCGCC AGCGTCACCC AGGCCGGCGG CATCATGACC
TTAGATGATC TTAAAGGCTA TCGTGTGGTC GAGCGTCAAC CTGTCCAGGG CGAGTATCGC
GGCTACCAGG TGATCTCCAT GCCGCCCCCC TCATCCGGTG GCATACATAT TATCGAGATG
CTCAACATGC TCGAGCCTTA CCCCATCGCC AAGTTAGGCC ATAATACCGC CGACACCCTG
CATTTGATGG CCGAGGTGAT GAAACGCGCC TATGCCGATC GCAGCGAATA TCTGGGGGAT
CCCGATTTTG TTGAGGTACC GGTGAAAGCG CTCATCAGTA AAGATTATGC CAAGTCCCGC
GCCAAGGGGA TCGCCATCAA CCGCGTCACC CCAAGCAGCG AAATCGCTCC GGGCAAGCTC
GCAGGTTACG AAAGCCCACA GACCACCCAC TACTCTGTGG TCGATAAGTG GGGCAATGCG
GTGGCCAACA CCTACACCCT CAACTTCAGC TATGGCTCGG GCCTGGTGGC CGAAGGCACG
GGCATTCTGC TCAACAATGA GATGGACGAT TTCTCAGCCA AACCCGGCGT ACCTAATGGC
TATGGCCTGA TCGGCGGCGA TGCCAATGCG GTCGAAGGCG GCAAGCGCCC CCTCAGCTCT
ATGAGCCCAA CTATAGTGAT GAAAGACGGC AAGCCCTTCA TCGTCACCGG CAGCCCAGGT
GGGTCACGCA TCATCAACAC CACACTACAA ATCATCATGA ATGTGATCGA TCATGGACTC
AATATCGCCG AAGCCAGCTA CGCTAGCAGG GTGCATCACC AATGGCTGCC CGACGAGCTG
AGAGTGGAGA AGAGCCTCAA TCGCGACACC ATCTCGCTAT TGGAAGCCAG AGGCCACAAG
GTCAGCGTCA AAGATGCCAT GGGCTCGACC CAGTCGATCA TGATCACCGA CGAAGGCCTG
TTTGGCGCCT CAGATCCTCG CCGCGCCGGC AGTGCGACAG CGGGTTACTA G
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| Protein sequence | MRPIKTLLFA ISLSLPLVAG QFAQATESSI YSHSATVQPI WAKHGMVASQ EAVATQVGVD
ILKQGGNAVD AAVGVGFALA VTLPRAGNIG GGGFMLVHLA EGNKTVAIDY REVAPKRAHK
DIFLNEQGDA VAKLSREHGL AVGVPGTVMG MELALKKYGT MTMAQVIEPA IKLAEQGITV
TPDLATSLAG LKRRISQWPS SKAIFYRPDG SNFEIGDTLS QKALAHSLKL IKAQGSKGFY
EGETAEKIVA SVTQAGGIMT LDDLKGYRVV ERQPVQGEYR GYQVISMPPP SSGGIHIIEM
LNMLEPYPIA KLGHNTADTL HLMAEVMKRA YADRSEYLGD PDFVEVPVKA LISKDYAKSR
AKGIAINRVT PSSEIAPGKL AGYESPQTTH YSVVDKWGNA VANTYTLNFS YGSGLVAEGT
GILLNNEMDD FSAKPGVPNG YGLIGGDANA VEGGKRPLSS MSPTIVMKDG KPFIVTGSPG
GSRIINTTLQ IIMNVIDHGL NIAEASYASR VHHQWLPDEL RVEKSLNRDT ISLLEARGHK
VSVKDAMGST QSIMITDEGL FGASDPRRAG SATAGY
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