| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2141 |
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| Symbol | |
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| ID | 4923361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2487318 |
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| End bp | 2488505 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640163726 |
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| Product | lytic murein transglycosylase |
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| Protein accession | YP_001094266 |
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| Protein GI | 127513069 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02282] lytic murein transglycosylase B
[TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000982897 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAAAAAT TGCTCACCTT TGCATCCCTG ATCCTGGCAA CCGGCTTGCC AAGCCTTAGC
GCGCTCGCCC AAGATTTCGA TACCTGTGTC AGCGCACTCA AACAGAAGGC GCTGGCCGCC
GGGGTGTCGA GCAAGACGGT AGAAGAGGGG CTGGGTCAGG TGAAGTATGT GGCCAGGGTG
ATAGAGCTAG ATAAGAAGCA GCCGGAATTT AGTCAGACCT TCGACAACTA TTTCTCCAAA
CGCGTGACTG ACTGGCGGGT TCAGGAGGGC AGACGTCTGC TTAAGCAGCA TGGCCAGCTT
CTGCATAAGT TGCAGCAAGA ATATGGCATT CCGCCCCAGT ATCTGGTGGC CTTCTGGGGA
CTGGAGACCA ATTTCGGCTC CTATAAAGGC AAGATGCCGG TGATCGACTC CCTGACAACC
CTTGCCTGCG ATCCGAGACG CAGTGACTAT TTTACCGGTG AATTAATTCA GGCGTTGAAG
CTCAAAGAGG CCTACCAATT TGATAACGCC CAGATGCAAG GCTCCTGGGC CGGCGCCATG
GGGCACACTC AGTTTATGCC CTCGGCCTAT GCCAAGTATG CGGTGGACGC GGATGGTGAC
GGCAAGGCCG ATCTGTTTAA CAGTACCCAA GACGCCCTGT CGAGTGCGGC TAACTTCTTG
AATAATCTCG GTTGGATGCG CAACGAGCGC TGGGGCCGCG AGGTAAGCTT GCCTAAGGAT
TATGATTATC GTCACCTGGG TCGTAATGAT AAACAAAGTT TAACCACCTG GGCCGGTTTA
GGGATCACTC AGGCCAATGG CCGCGCGCTG TCGACACCCG ACATGCAAGC CGCCCTTTAT
CTACCGGCAG GGCATACGGG GCCTGCTTTC TTAGGTTATG GCAACTTCGA TGTGATCATG
CGCTGGAACC GCTCAGAGTT TTACGCCATC GCCGTCGGGC ATCTGGCCGA TCGCATCAAT
GGTGGTGCGC GCCTGCATGT GGCGCCGCCA AAGCATGACA ACATCAGCCG CGCCAAGCTC
AAGCAGTTAC AGGCCAAACT CAACGAGAAG GGCTATGAGG TGGGTAAGCC TGATGGCGTG
CTTGGGGTCA ACTCCCGCGC CGGCCTGCAG GCCTTTCAGC GCAGCGTTGG CCTGGTGGCC
GACGGTTTTC CAAGCGATGA GACCTTCAGC GCCCTGGGCA TCAAATAG
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| Protein sequence | MKKLLTFASL ILATGLPSLS ALAQDFDTCV SALKQKALAA GVSSKTVEEG LGQVKYVARV
IELDKKQPEF SQTFDNYFSK RVTDWRVQEG RRLLKQHGQL LHKLQQEYGI PPQYLVAFWG
LETNFGSYKG KMPVIDSLTT LACDPRRSDY FTGELIQALK LKEAYQFDNA QMQGSWAGAM
GHTQFMPSAY AKYAVDADGD GKADLFNSTQ DALSSAANFL NNLGWMRNER WGREVSLPKD
YDYRHLGRND KQSLTTWAGL GITQANGRAL STPDMQAALY LPAGHTGPAF LGYGNFDVIM
RWNRSEFYAI AVGHLADRIN GGARLHVAPP KHDNISRAKL KQLQAKLNEK GYEVGKPDGV
LGVNSRAGLQ AFQRSVGLVA DGFPSDETFS ALGIK
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