Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_2126 |
Symbol | |
ID | 4923492 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 2464627 |
End bp | 2465538 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640163711 |
Product | ATPase |
Protein accession | YP_001094251 |
Protein GI | 127513054 |
COG category | [R] General function prediction only |
COG ID | [COG0714] MoxR-like ATPases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTCATA CCAGCATCAC GGCGATCTTA AACCAGCTGC AACGCGTGCT TCTGGGTAAA CCCCATCAGA TAAAATTGGC CCTCACCTGC ATCCTCGCTA AGGGACACCT TCTTATCGAA GATCTGCCCG GCATGGGCAA GACCAGTCTC TCCCAGGGGA TGGCCCAGAG CCTGGGGCTT AGCCATCAGC GCATCCAATT TACCAGCGAT ATGCTGCCGG CGGATATTCT CGGCGTCTCC ATCTTCGACA AGGAACAGTC CCAGTTTGTG TTCCATCCAG GTCCCATCTT CAAGCAGATG ATCCTGGCCG ATGAGATTAA CCGCGCCAGC CCCAAGACCC AGAGCGCGCT GCTTGAGGCC ATGGCCGAGC AGCAGATCAC GGTCGATGGC GTTACCCACG CCCTGCCCAG CCCCTTCTTC GTGATCGCTA CCCAGAACCC CAGCGAACAG TCGGGTACCT TTCCCCTGCC GGAATCCCAG CTCGACCGCT TCATGATGCG GATTTCCATC GGCTATCCCG ACGAGACCGC CGAGTTGGCC ATGCTGAAGG GGGAAGATAT CTCACCTCAG CAGCAACACC TGCCCGCCTG TGTCGACCCA CTCACCTTGA TTGAGTTGCA GTCTCAGGTG ACTAAGGTTA AGGCCTCTGA GGCGCTGCTC AACTATATTC TCGCCCTGGT AAAAGGCTCA CGCCAGCTCA ACGAAGGTTA CGGGCTGTCG CCCAGGGCCA GCAAGGCGCT GCTCAACGCC GCCAAGGCCT GGGCCTTCAT TCAGGGACGC AACTATCTGG TGCCCGACGA TGTGCAGGCG GTGTTTGCCT CTGTCGCCGA ACACAGGCTA AGGCACACCA GCCAGCAACA GGGCGAGGCC CTCTCTCAGC GCTTGCTCGC CAGTACCAAT CCTATCTTGT AA
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Protein sequence | MSHTSITAIL NQLQRVLLGK PHQIKLALTC ILAKGHLLIE DLPGMGKTSL SQGMAQSLGL SHQRIQFTSD MLPADILGVS IFDKEQSQFV FHPGPIFKQM ILADEINRAS PKTQSALLEA MAEQQITVDG VTHALPSPFF VIATQNPSEQ SGTFPLPESQ LDRFMMRISI GYPDETAELA MLKGEDISPQ QQHLPACVDP LTLIELQSQV TKVKASEALL NYILALVKGS RQLNEGYGLS PRASKALLNA AKAWAFIQGR NYLVPDDVQA VFASVAEHRL RHTSQQQGEA LSQRLLASTN PIL
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