| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2078 |
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| Symbol | |
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| ID | 4923614 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2401786 |
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| End bp | 2402532 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640163660 |
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| Product | hypothetical protein |
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| Protein accession | YP_001094203 |
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| Protein GI | 127513006 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0217] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.283628 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGGTC ACAGTAAATG GGCCAACATC AAGCACCGCA AGGCGGCACA AGACGCCAAA
CGCGGTAAAC TCTTCACCAA ATTCATTCGC GAACTCACGG TAGCGGCCAG AGAAGGCGGC
TCGGATCCCG ATTCAAACCC GAGACTCAGG GCGGCAATCG ATAAGGCGCT GTCAAATAAC
ATGACCCGCG ACACGGTCGA GCGCGCCATC AAGCGCGGCG CCGGTGAGCT AGACGGTCAG
GTGCTAGAAA CCATCATGTA TGAAGGTTAT GGTCCGGGCG GCACCGCCGT GATGGTCGAG
ACCATGACAG ACAACCGTAA CCGTACCGTT TCAGGCGTGC GTAACGCCTT TAGCAAGTCG
GGCGGTAACC TAGGCACAGA TGGCTCTGTA GCTTATCTGT TCGAGAAGCG TGGCGTGATC
TCTTACGCCG AAGGCAGCGA TGAAGACACC ATCATGGATG CGGCGCTCGA CGCCGGCGCC
GAAGATGTGG TGACCAATGA TGATACCTCT ATCGATGTCT ACACCACGCC TGAGGCCTTT
GGTACGGTTA AGGATGCACT GGATGCCGCC GGTCTCGACG CGGTTAACGC CGAGGTGACC
ATGGTGCCAT CGACTAAGGC TGAGCTGGAT GCCGAGACGG CGCCTAAATT CCTGCGTCTC
ATCGATAACC TTGAAGATCA CGACGATGTA CAAGAGGTCT ATCATAATGC CGAGATCTCC
GATGAGATCT TAGCCAGCCT CGAATAG
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| Protein sequence | MAGHSKWANI KHRKAAQDAK RGKLFTKFIR ELTVAAREGG SDPDSNPRLR AAIDKALSNN
MTRDTVERAI KRGAGELDGQ VLETIMYEGY GPGGTAVMVE TMTDNRNRTV SGVRNAFSKS
GGNLGTDGSV AYLFEKRGVI SYAEGSDEDT IMDAALDAGA EDVVTNDDTS IDVYTTPEAF
GTVKDALDAA GLDAVNAEVT MVPSTKAELD AETAPKFLRL IDNLEDHDDV QEVYHNAEIS
DEILASLE
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