| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2076 |
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| Symbol | ruvA |
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| ID | 4923612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2400643 |
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| End bp | 2401260 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640163658 |
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| Product | Holliday junction DNA helicase RuvA |
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| Protein accession | YP_001094201 |
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| Protein GI | 127513004 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0632] Holliday junction resolvasome, DNA-binding subunit |
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| TIGRFAM ID | [TIGR00084] Holliday junction DNA helicase, RuvA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.438835 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATAGGTC GTTTACGGGG ATTACTCGTC GAGAAGCAGG CGCCCGAGGT GCTGATTGAA
ACTGGCGGTG TCGGCTATGA GGTGCAGATG CCGCTCACCA GTTTTTACGA ATTGCCAGAA
TTAAACCAAG AGGCGGTGAT CTACACCCAC TTCGTGGTGC GTGAAGATGC CCAGCTGCTG
TACGGTTTCA TCACCAAGCA GGAGAGGGCG CTGTTCAGGC TGCTGATCAA GACCAATGGC
GTCGGTCCTA AGCTGGCACT GACCATACTC TCTGGCATGA CGGCGGGCGA ATTTGTGAAA
TGCGTCGAGC ATGACGATAT CGCAACCCTG GTTAAGCTGC CGGGTGTCGG CAAGAAGACT
GCGGAGCGTC TGTTGGTTGA GATGCGCGAC AAGCTTAAGA GCCTGATGGA AGCGTCCCAT
GGCAACGAGC GCGAGTTTGT GTTGCAGTCT AACTATACTC CTGCGCCTGT GGTTAACACT
GCCGAAGAAG ATGCCATCTC GGCGCTTTTG GCGTTAGGAT ATAAGCCGGC ACAGGCCAGT
AAGGCGGTGT CCAGTGTCTT CGAAGAGGGC ATGGATTCAG AAACCTTGAT CAAGGCATCG
CTGAAATCGA TGCTCTAG
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| Protein sequence | MIGRLRGLLV EKQAPEVLIE TGGVGYEVQM PLTSFYELPE LNQEAVIYTH FVVREDAQLL
YGFITKQERA LFRLLIKTNG VGPKLALTIL SGMTAGEFVK CVEHDDIATL VKLPGVGKKT
AERLLVEMRD KLKSLMEASH GNEREFVLQS NYTPAPVVNT AEEDAISALL ALGYKPAQAS
KAVSSVFEEG MDSETLIKAS LKSML
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