| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2075 |
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| Symbol | ruvB |
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| ID | 4923439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2399610 |
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| End bp | 2400623 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640163657 |
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| Product | Holliday junction DNA helicase RuvB |
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| Protein accession | YP_001094200 |
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| Protein GI | 127513003 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2255] Holliday junction resolvasome, helicase subunit |
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| TIGRFAM ID | [TIGR00635] Holliday junction DNA helicase, RuvB subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGAAG CCGATAGGTT AGTTCACGCC CAGCCCCAAG GCACAGAGGA GCGGGACGAG
CAGATAGATA GGGCGATGCG TCCTAAGCTG CTGGATGAGT ACACGGGCCA GGACGATACC
AGAGCCCAGC TCAAGGTGTT TATCGAGGCG GCGCAGAAGC GCGGCGAGGC CCTTGATCAT
ATGTTGATCT ACGGACCTCC AGGCCTGGGT AAGACCACGC TCGCCATGAT CGTCGCCAAC
GAGATGGGGG TTAACATCAA GTCCACCTCG GGCCCTGTGC TGGAGAAGGC GGGTGATCTC
GCGGCCCTGC TTACCAATCT CGAGGCCGGT GACGTGCTCT TCATCGACGA GATCCACAGA
CTTAGCCCTG TGGTGGAGGA GATCCTCTAC CCGGCGATGG AAGACTATCA GCTGGATATC
ATGATAGGCG AGGGCCCGGC GGCGCGCTCC ATTAAGCTTG AGCTGCCTCC CTTTACCCTG
ATTGGTGCAA CTACTCGCGC CGGCGCACTG ACATCGCCGC TGCGTGCCCG TTTTGGCATC
CCCCTGCGTC TCGAGTTCTA TAACGTCAAA GATCTTAGCA GTATTGTCAC GCGCTCGGCC
AAGGTGCTTG AGCTGCCGAT CGATCAAGAA GGCGCGGTAG AGGTCGCCAG ACGTTCTCGC
GGCACGCCGC GTATCGCTAA CCGTTTGCTT AGACGGGTGC GAGACTACGC CGAGGTGAAG
CACGATGGCG AGGTCAACAA GGTGGTCGCC GAGAGCGCTT TGGATATGCT GGATGTGGAT
GTCGAAGGCT TCGATTATAT GGACCGTAAG CTGCTGCTGG CCATCATAGA TAAGTTTATG
GGCGGCCCTG TGGGCCTGGA TAACCTGGCC GCGGCCATCG GCGAAGAGCG TGAGACTATC
GAAGATGTGC TCGAACCCTT TCTGATCCAG CAAGGCTTCA TCCAGCGCAC CCCAAGAGGG
CGTATCGCGA CGGCGAGAGC CTATCAGCAC TTCAACCTGA TCCAGCCGGA ATAA
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| Protein sequence | MIEADRLVHA QPQGTEERDE QIDRAMRPKL LDEYTGQDDT RAQLKVFIEA AQKRGEALDH
MLIYGPPGLG KTTLAMIVAN EMGVNIKSTS GPVLEKAGDL AALLTNLEAG DVLFIDEIHR
LSPVVEEILY PAMEDYQLDI MIGEGPAARS IKLELPPFTL IGATTRAGAL TSPLRARFGI
PLRLEFYNVK DLSSIVTRSA KVLELPIDQE GAVEVARRSR GTPRIANRLL RRVRDYAEVK
HDGEVNKVVA ESALDMLDVD VEGFDYMDRK LLLAIIDKFM GGPVGLDNLA AAIGEERETI
EDVLEPFLIQ QGFIQRTPRG RIATARAYQH FNLIQPE
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