| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2072 |
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| Symbol | |
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| ID | 4923436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2394292 |
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| End bp | 2394933 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640163654 |
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| Product | endonuclease III |
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| Protein accession | YP_001094197 |
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| Protein GI | 127513000 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0177] Predicted EndoIII-related endonuclease |
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| TIGRFAM ID | [TIGR01083] endonuclease III |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATACCG AGAAGCGCCG CAAGATCCTG GAGATCTTTC GCGACAACAA CCCTAAGCCA
GAAACCGAGC TTAACTTCTC CTCTCCCTTC GAGCTGCTGG TTGCCGTCAC CCTGTCGGCC
CAGGCCACGG ACGTGAGCGT CAACAAGGCC ACCGACAAGT TATTTCCCGT CGCAAATACC
GCCCAAGCCA TCTATGACCT AGGCGTCGAG GGGCTCAAAG ACTATATCAA GACCATAGGC
CTGTATAACA ACAAGGCAAT CAACGTCATC AAGGCGTGCG AGATCTTGCT GGAGAAGCAC
GGCGGCGAGG TGCCCGAAGA CAGAGAGGCG CTCGAAGCCC TGCCTGGCGT GGGTCGTAAG
ACGGCCAACG TAGTATTAAA CACCGCCTTC GGCTGGCCGA CCATTGCCGT CGATACCCAT
ATCTTTCGCG TCGCCAACCG CACCAAGTTT GCCATGGGCA AGAATGTGGA TCAGGTGGAG
CAGAAGATGT TAAAGGTAGT ACCAGCCGAA TTTAAGGTAG ATGTGCACCA CTGGTTTATT
CTTCACGGCC GTTATACCTG TGTCGCCCGT AAGCCGAGAT GCGGTAGCTG TTTAATAGAA
GAGCACTGCG AGTTTAAAGA GAAGGTCTAT CCAGACGAAT AG
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| Protein sequence | MNTEKRRKIL EIFRDNNPKP ETELNFSSPF ELLVAVTLSA QATDVSVNKA TDKLFPVANT
AQAIYDLGVE GLKDYIKTIG LYNNKAINVI KACEILLEKH GGEVPEDREA LEALPGVGRK
TANVVLNTAF GWPTIAVDTH IFRVANRTKF AMGKNVDQVE QKMLKVVPAE FKVDVHHWFI
LHGRYTCVAR KPRCGSCLIE EHCEFKEKVY PDE
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