| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2071 |
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| Symbol | |
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| ID | 4923435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2393590 |
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| End bp | 2394288 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640163653 |
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| Product | electron transport complex RsxE subunit |
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| Protein accession | YP_001094196 |
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| Protein GI | 127512999 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4660] Predicted NADH:ubiquinone oxidoreductase, subunit RnfE |
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| TIGRFAM ID | [TIGR01948] electron transport complex, RnfABCDGE type, E subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAACT ATCGTGATAT CGCCTGGCAA GGACTGTGGA AGAATAATCC GGGCCTAGTA
CAGCTCCTGG GCCTGTGTCC ACTGCTGGCG GTCACCGCTA CACTAACCAA CGCCATAGGC
CTTGGGTTAG CCACGCTTGT TGTGCTGGTC GGCTCCAACG TGCTGGTCTC TCTGGTGCGA
GAGTTTGTGC CCAAAGAGAT CCGCATCCCC GTATTTGTGA TGATCATCGC CGCGCTGGTG
ACCTGTGTGC AGCTGCTGAT CAACGCCTAT GCCTATGGCC TCTATCTGTC ACTGGGGATC
TTCCTGCCGC TTATCGTCAC CAACTGTGTC ATCATTGGCC GCGCCGAGGC CTTCGCCTCA
CGCAACAGCG TGGTTAAGGC GGCGTTCGAT GGCCTGATGA TGGGACTGGG CTTCACCCTG
GTGCTCATGC TGTTAGGCGC TTGCCGCGAG ATCTTGGGCC AGGGCACACT GTTTGACGGT
GCCGATCTGC TGCTTGGCGA CTGGGCTAAA GGGCTAACGA TTCATCTCTG GCAGGTGGAT
ACCAACTTCC TGCTGGCCAT GCTGCCGCCC GGCGCCTTTA TCGCCATGGG CTTTCTTATC
GCCATCAAGA ACATGATCGA CAAGCAGCTC GAGGCGCGTA AACCCGCCTT AGAGGCCGCA
CCAGCCGTCA CCCGCGCACG CATTACCAAG GTGAGTTAA
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| Protein sequence | MSNYRDIAWQ GLWKNNPGLV QLLGLCPLLA VTATLTNAIG LGLATLVVLV GSNVLVSLVR
EFVPKEIRIP VFVMIIAALV TCVQLLINAY AYGLYLSLGI FLPLIVTNCV IIGRAEAFAS
RNSVVKAAFD GLMMGLGFTL VLMLLGACRE ILGQGTLFDG ADLLLGDWAK GLTIHLWQVD
TNFLLAMLPP GAFIAMGFLI AIKNMIDKQL EARKPALEAA PAVTRARITK VS
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