| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2066 |
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| Symbol | |
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| ID | 4923430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2388127 |
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| End bp | 2388705 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640163648 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit E |
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| Protein accession | YP_001094191 |
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| Protein GI | 127512994 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4657] Predicted NADH:ubiquinone oxidoreductase, subunit RnfA |
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| TIGRFAM ID | [TIGR01943] electron transport complex, RnfABCDGE type, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0151364 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGAAT ATCTCCTCCT ATTGGTCGGC ACAGTGCTGG TCAACAACTT TGTATTAGTT
AAATTTCTCG GCCTCTGCCC CTTCATGGGG GTCTCGAGTA AGTTGGAATC GGCTATCGGC
ATGTCGATGG CGACCACCTT CGTGCTCACC CTTGCCTCTA TCTTAAGCTA CCTGGTCGAC
ACCTATCTGT TGACCCCTTT CGATCTTAGC TATCTGCGCA CCATGGCCTT TATCTTGGTT
ATCGCCGTCG TGGTGCAATT TACCGAGATG CTGGTGCAGA AGACCAGTGC CGCCCTGCAC
AGGGCTCTGG GTATCTATCT GCCGCTGATC ACCACCAACT GCGCCGTATT GGGTGTAGCC
CTGCTCAACG TCAACGAGAA ACACGACTTT ATCGAGTCGG CCATTTATGG TTTTGGCGCG
GCGGTCGGTT TCTCCATCGT CTTGATCCTC TTCTCTGCCA TGCGTGAGCG CCTCGCCGCC
GCCGATGTTC CGGCGCCTTT CAAGGGCGGC GCCATCGCCA TGATCACCGC AGGCCTGATG
TCTCTGGCCT TCATGGGCTT CACAGGTTTG GTTAATTAA
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| Protein sequence | MSEYLLLLVG TVLVNNFVLV KFLGLCPFMG VSSKLESAIG MSMATTFVLT LASILSYLVD
TYLLTPFDLS YLRTMAFILV IAVVVQFTEM LVQKTSAALH RALGIYLPLI TTNCAVLGVA
LLNVNEKHDF IESAIYGFGA AVGFSIVLIL FSAMRERLAA ADVPAPFKGG AIAMITAGLM
SLAFMGFTGL VN
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