Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_2048 |
Symbol | |
ID | 4923732 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 2363612 |
End bp | 2365084 |
Gene Length | 1473 bp |
Protein Length | 490 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640163623 |
Product | glucose-6-phosphate 1-dehydrogenase |
Protein accession | YP_001094173 |
Protein GI | 127512976 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0364] Glucose-6-phosphate 1-dehydrogenase |
TIGRFAM ID | [TIGR00871] glucose-6-phosphate 1-dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000103932 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.421774 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCATGA CATCACCAGA AGCCAAAGCT TGTGATTTTG TATTGTTCGG CACCAAAGGC GATCTCGCCA GACGTAAGTT ACTCCCTTCT CTTTATCAGC TGGATAAGGC AGGTCTACTC AATGAGGAGA CTAAGATAGT CGGAGTAGCC AAAGACGCCT TTAGCCATGA TGAGTATCAG GAGCTGGTTG TCACGGCATT AAAGAGCTTC GTTAAAGAAG CCCTGTGTGA TGAAACCCTC GAGCGATTCC TAAAGCGCTG TGTTTATATT GGGACTAACT TCACCGAGGC TGAAGGTTAC AGTGCCTTCC ATGAGATCCT CGAGCCCAAG AAGCGCGTCA TGGTGAACTA CTTCGCGACG CCGCCGGCCA TCTTCGGCGA TATCTGTCGC TGCCTGCATG AACAAAACCT TATCTATCCT GATACCCGTG TCGTCCTCGA AAAGCCCATC GGCTCAGATC TCGCTTCTTC TAAAGTCATC AACGATCAAG TCAGCGCCTA CTTTAATGAA AACCAGGTCT ATCGTATCGA CCACTACCTA GGTAAAGAGA CGGTACAGAA CCTGATCGCG CTGCGATTCG CCAACTCCTT GTTTGCCTCT AAGTGGGATA ACCGTACGAT TGATCATGTG CAGATCACCG TTGCCGAAGA GGTGGGCATC GAAGGGCGTT GGGGCTATTT CGATAAAGCC GGTCAGATGC GCGACATGAT CCAAAACCAT TTGCTACAGG TACTTACCTT GGTCGCCATG GATCCGCCGG TAAACCTAGA TGCTGACAGC ATTCGCGATG AGAAGGTAAA AGTGCTTAAG TCACTGCGTA AGATAGATGC CGATAACATC TATGAAAACA CGGTGCGCGG ACAGTACTCG GCCGGTTTCC TCAAAGGGGC GCCAGTGCCT GGCTACTTGG AGGAAGAGGG CGCAAATACT CAGTCTCACG CCGAAACCTT CGTCGCCCTG CGCGTCGATA TCGACAACTG GCGTTGGGCC GGTGTGCCTT TCTATCTGCG TAGCGGCAAG CGTATGCCGA CCAAGAGTTC TGAAATCGTT GTCTATTTCA AGAACCCACC ACACAACCTG TATCGCTCAA GCTACCGTAA CCTGCCGCCA AACAAGCTGA CGATTCGTCT GCAACCTCAC GAAGGCGTTG AGATCCAGAT GATGAACAAG GTGCCGGGTC TTGAGCAGAA ACAAAGACTG CAAACCACTA AGCTGGACTT GAGTTTCTCC GATACTTTCA AGAACGATCG TATCGCCGAT GCCTATGAGC GTCTGCTGCT CGAAGCCATG CTGGGTAATC AGGCGCTATT CGTACGCCGC GATGAAGTTG AGCAGGCATG GACCTGGGTC GACGGCATCA TTCAGGCGTG GGAAGAGAGC AATGAGAAGC CTAAGCCATA CCCAGCCGGT AGCTGGGGCC CTGTGGCCTC AGTTGCTTTG ATCGCTAAAG ACGGCCGCTC TTGGGACGAA TAA
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Protein sequence | MGMTSPEAKA CDFVLFGTKG DLARRKLLPS LYQLDKAGLL NEETKIVGVA KDAFSHDEYQ ELVVTALKSF VKEALCDETL ERFLKRCVYI GTNFTEAEGY SAFHEILEPK KRVMVNYFAT PPAIFGDICR CLHEQNLIYP DTRVVLEKPI GSDLASSKVI NDQVSAYFNE NQVYRIDHYL GKETVQNLIA LRFANSLFAS KWDNRTIDHV QITVAEEVGI EGRWGYFDKA GQMRDMIQNH LLQVLTLVAM DPPVNLDADS IRDEKVKVLK SLRKIDADNI YENTVRGQYS AGFLKGAPVP GYLEEEGANT QSHAETFVAL RVDIDNWRWA GVPFYLRSGK RMPTKSSEIV VYFKNPPHNL YRSSYRNLPP NKLTIRLQPH EGVEIQMMNK VPGLEQKQRL QTTKLDLSFS DTFKNDRIAD AYERLLLEAM LGNQALFVRR DEVEQAWTWV DGIIQAWEES NEKPKPYPAG SWGPVASVAL IAKDGRSWDE
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