| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2041 |
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| Symbol | |
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| ID | 4923770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2355602 |
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| End bp | 2357230 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640163616 |
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| Product | hypothetical protein |
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| Protein accession | YP_001094166 |
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| Protein GI | 127512969 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2194] Predicted membrane-associated, metal-dependent hydrolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.017573 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGTCAC GCGTTAAAAC CCTTTCGGTG AATCAGTTTA CACTGATCAC CGCGTTATTT
TATGTAGGCG TATTTAATAT TCCGCTGTTT CAGATCGTTC AGCAGGGTAT AGAGAAGCAG
GGTGAGGTTA ACTACCTCTT CATTGCCACC ATTCCGCTAT TTCTTATCTT CGCGTTAAGC
TTCATCTTCT CGCTTTTTTC GGTTAAGTAT CTGCTTAAGC CGTTTTTCAT CATCGTTACC
CTGATCTCTT CCAGCGTGTT TTTCGCCGCG CTGCAATATG GCGTCGTGTT CGATTATGGC
ATGATCGAAA ACACAGTGCA GACCAACAGC GCCGAGGCCT TAACCTATCT TAATTGGTCT
TCAATCTTAA ACTTTACCCT GACCGGATTG CTGCCGGCCC TGCTGATCTT TAAGGCCGAT
ATCGTCTACA AGCCTTTCGT CAAAGAGCTA CTGCATAAGC TTGCCTTCAT GTTCGCTATG
CTTGCCGGTA TCGCGGTGAT CGGCTTCTTC TATTATCAAA ACTATGTCGC CTTTGGCCGT
AACAACGATC AGATGAAGCG CTACATAGTC CCTACCTATG CCATCGGATC TATGATCAAG
TATGTCAAGG TTAACTACTT CCAGGAACCG CTGGTCTATA AGGTGCAGGG CAAAGATGCC
AAGAATCTGA CCCTAGATCA TAACGACAAG CCTAACTTGG TCGTGGTTGT GGTCGGCGAG
ACCGCCAGGG CCCATAACTA TGAGTACTAT GGCTATGACA AGCCAACCAA CGCCCATACC
AAGGCTTATG ACATGATCGC CTTTAAAGAT ACCGAGTCAT GCGGCACGGC AACGGCCGTG
TCCCTGCCTT GTATGTTCTC GAGTATGGAT AGAGAAGATT ATGACGCGCG CAAGGCACAG
GCCCAGGACA CCGCCATGGA CGTGCTGGAT CACGCCGGTA TCTCGCTGGA CTGGCTGGAT
AATGACAGTG GCTGCAAGGG CGTGTGTGAC CGCGTTAAAC ACATCAACAT AGATCTCAAT
AGCGACCCAG AGCTCTGCGA CGGTCACTAC TGCTACGATC AGGTGCTGCT GAATGAACTC
GATAAGCGCC TTGCCGAAGG TGTCACCAAG GATACCCTTA TCGTGCTGCA CATCATAGGT
TCACACGGCC CGACATACTA TTTGCGCTAT CCAGAAGCCC ACCGCAAGTT TGTGCCCGAT
TGTCAGCGTA GCGACATCCA AAACTGCAGC GATGAAGAGC TGATGAATAC CTATGACAAC
ACCATCTTGT ATTCCGACTA TATTATCGCT CAGGTGATCT CACGCCTTGA GGCGCAGCAG
AACAAGGCCG ATACCGCCTT GCTCTATGTG TCCGACCACG GCGAGTCGCT GGGGGAGAGT
GGCATGTACC TTCACGGCGC GCCTTATGCG ATAGCGCCGG ATGAGCAGAT CAAGATCCCT
ATGCTGGCCT GGCTCTCAGC GGACTTCGCC TCCGACAATG GTTTAGACAA GCAGTGCCTG
CGTGACCATG CCACCAAAGG TGGTTTCTCA CACGATAACC TCTTTTCCAG CCTGCTTGGT
CTAATGAACG TATCGACCGA GGTGTATCGC AAGGAGAAGG ATCTGTTTGC GACTTGTCGG
GTAAAATAG
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| Protein sequence | MLSRVKTLSV NQFTLITALF YVGVFNIPLF QIVQQGIEKQ GEVNYLFIAT IPLFLIFALS
FIFSLFSVKY LLKPFFIIVT LISSSVFFAA LQYGVVFDYG MIENTVQTNS AEALTYLNWS
SILNFTLTGL LPALLIFKAD IVYKPFVKEL LHKLAFMFAM LAGIAVIGFF YYQNYVAFGR
NNDQMKRYIV PTYAIGSMIK YVKVNYFQEP LVYKVQGKDA KNLTLDHNDK PNLVVVVVGE
TARAHNYEYY GYDKPTNAHT KAYDMIAFKD TESCGTATAV SLPCMFSSMD REDYDARKAQ
AQDTAMDVLD HAGISLDWLD NDSGCKGVCD RVKHINIDLN SDPELCDGHY CYDQVLLNEL
DKRLAEGVTK DTLIVLHIIG SHGPTYYLRY PEAHRKFVPD CQRSDIQNCS DEELMNTYDN
TILYSDYIIA QVISRLEAQQ NKADTALLYV SDHGESLGES GMYLHGAPYA IAPDEQIKIP
MLAWLSADFA SDNGLDKQCL RDHATKGGFS HDNLFSSLLG LMNVSTEVYR KEKDLFATCR
VK
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