| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2029 |
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| Symbol | rplT |
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| ID | 4923868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2343311 |
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| End bp | 2343670 |
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| Gene Length | 360 bp |
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| Protein Length | 119 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640163602 |
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| Product | 50S ribosomal protein L20 |
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| Protein accession | YP_001094154 |
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| Protein GI | 127512957 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0292] Ribosomal protein L20 |
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| TIGRFAM ID | [TIGR01032] ribosomal protein L20 |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000108915 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000236508 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCCTAGAG TTAAGCGTGG TGTAACCGCT CGTGCTCGTC ACAAGAAAGT ATTAAAACTA
GCTAAAGGTT ATTACGGAGC TCGCTCACGT ACTTACCGTG TTGCTAAGCA AGCAGTAACC
AAAGCTGGCC AATATGCTTA CCGTGACCGT CGTCAGAAGA AACGTCAATT CCGTCAACTG
TGGATTGCAC GTATCAATGC GGCTTCTCGT CAAAATGGTC TGTCTTACAG CCGTTTCATC
AACGGTCTGA AAAAGGCGTC TATCGAAATC GATCGTAAGA TTTTGGCAGA CATCGCTGTA
TTCGACAAAG TGGTTTTCGC CACTCTAGTT GAAAAGGCAA AAGAAGCTCT AGCTAAGTAA
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| Protein sequence | MPRVKRGVTA RARHKKVLKL AKGYYGARSR TYRVAKQAVT KAGQYAYRDR RQKKRQFRQL
WIARINAASR QNGLSYSRFI NGLKKASIEI DRKILADIAV FDKVVFATLV EKAKEALAK
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