| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2028 |
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| Symbol | |
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| ID | 4923867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 2342070 |
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| End bp | 2343020 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640163601 |
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| Product | thioredoxin reductase |
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| Protein accession | YP_001094153 |
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| Protein GI | 127512956 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0492] Thioredoxin reductase |
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| TIGRFAM ID | [TIGR01292] thioredoxin-disulfide reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000102058 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000262597 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCCAAG CTAGACACTG TAACTTATTA ATTTTGGGTT CGGGCCCTGC TGGGTACACC
GCCGCTGTTT ATGCTGCCAG AGCAAACCTA AAGCCCGTAT TGATCACAGG TATGCAGCAA
GGTGGTCAGC TGACGACCAC GACTGAAGTT GAAAACTGGC CAGGCGACGC CGACGATCTA
ACCGGTCCGG CTTTGATGGA GCGTATGCAG AAGCATGCCG AGAAATTTGA GACTGAGATC
ATCTTCGACC ACATCAACGA AGTTAACCTG CAAGAGCGCC CTTTCCAACT GAAAGGCGAC
AGCGGTGAGT ACACTTGTGA TGCCTTGATC ATCTCAACCG GCGCCTCGGC CATGTACCTT
GGCCTTGAAT CGGAAGAAGC CTTCAAGGGT AAAGGTGTTT CGGCCTGTGC CACCTGTGAT
GGTTTCTTTT ACCGTAACCA GAAGGTTGCC GTGATCGGTG GTGGTAACAC AGCCGTTGAA
GAAGCGCTTT ACCTGAGCAA CATCGCATCA GAAGTTCACC TGATCCATCG CCGTGACAGC
TTCCGCTCTG AGAAGATCCT TACTAAGCGC CTGATGGACA AGGTTGCGAA CGGCAACATA
GTTCTGCATC TCGACAGCAC CCTAGACGAA GTCGTTGGCG ACAACATGGG TGTGACCGGC
GTGAAGATCA AGAGCACCAA AGATGAAAGC ATTACCGAAT TTGATGTCAT GGGCGTGTTC
GTCGCCATCG GCCACAAGCC AAACACTCAG ATGTTTGAAG GTCAGCTAGA GATGAACAAC
GGCTACATTA AGGTGCAGAG CGGTCTTGGC GGCAATGCCA CCCAAACCAG CATTCCTGGT
GTATTCGCAG CTGGTGACGT GATGGATCAA CATTACCGTC AGGCGATCAC CTCTGCTGGG
ACCGGCTGTA TGGCAGCCCT AGATGCAGAG CGTTTCTTAG ACGCACAGTA A
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| Protein sequence | MSQARHCNLL ILGSGPAGYT AAVYAARANL KPVLITGMQQ GGQLTTTTEV ENWPGDADDL
TGPALMERMQ KHAEKFETEI IFDHINEVNL QERPFQLKGD SGEYTCDALI ISTGASAMYL
GLESEEAFKG KGVSACATCD GFFYRNQKVA VIGGGNTAVE EALYLSNIAS EVHLIHRRDS
FRSEKILTKR LMDKVANGNI VLHLDSTLDE VVGDNMGVTG VKIKSTKDES ITEFDVMGVF
VAIGHKPNTQ MFEGQLEMNN GYIKVQSGLG GNATQTSIPG VFAAGDVMDQ HYRQAITSAG
TGCMAALDAE RFLDAQ
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